The human oral microbiome in health and disease: from sequences to ecosystems

JR Willis, T Gabaldón - Microorganisms, 2020 - mdpi.com
The human oral cavity is home to an abundant and diverse microbial community (ie, the oral
microbiome), whose composition and roles in health and disease have been the focus of …

Optimizing the quality of clinical studies on oral microbiome: A practical guide for planning, performing, and reporting

E Zaura, VY Pappalardo, MJ Buijs… - Periodontology …, 2021 - Wiley Online Library
With this review, we aim to increase the quality standards for clinical studies with
microbiome as an output parameter. We critically address the existing body of evidence for …

Defining the oral microbiome by whole-genome sequencing and resistome analysis: the complexity of the healthy picture

E Caselli, C Fabbri, M D'Accolti, I Soffritti, C Bassi… - BMC microbiology, 2020 - Springer
Background The microbiome of the oral cavity is the second-largest and diverse microbiota
after the gut, harboring over 700 species of bacteria and including also fungi, viruses, and …

Impact of DNA extraction method and targeted 16S-rRNA hypervariable region on oral microbiota profiling

F Teng, SS Darveekaran Nair, P Zhu, S Li, S Huang… - Scientific reports, 2018 - nature.com
Amplification and sequencing of 16S amplicons are widely used for profiling the structure of
oral microbiota. However, it remains not clear whether and to what degree DNA extraction …

Citizen science charts two major “stomatotypes” in the oral microbiome of adolescents and reveals links with habits and drinking water composition

JR Willis, P González-Torres, AA Pittis, LA Bejarano… - Microbiome, 2018 - Springer
Background The oral cavity comprises a rich and diverse microbiome, which plays important
roles in health and disease. Previous studies have mostly focused on adult populations or in …

The performance of an oral microbiome biomarker panel in predicting oral cavity and oropharyngeal cancers

Y Lim, N Fukuma, M Totsika, L Kenny… - Frontiers in cellular …, 2018 - frontiersin.org
The oral microbiome can play a role in the instigation and progression of oral diseases that
can manifest into other systemic conditions. These associations encourage the exploration …

Beyond head and neck cancer: the relationship between oral microbiota and tumour development in distant organs

M Mascitti, L Togni, G Troiano, VCA Caponio… - Frontiers in cellular …, 2019 - frontiersin.org
An altered oral microbiota has been linked with the development of several oral diseases,
such as dental caries, periodontal disease, and oral stomatitis. Moreover, poor oral health …

Citizen-science reveals changes in the oral microbiome in Spain through age and lifestyle factors

JR Willis, E Saus, S Iraola-Guzmán… - npj Biofilms and …, 2022 - nature.com
The relevance of the human oral microbiome to our understanding of human health has
grown in recent years as microbiome studies continue to develop. Given the links of the oral …

Factors influencing oral microbiome analysis: from saliva sampling methods to next-generation sequencing platforms

E Bang, S Oh, U Ju, HE Chang, JS Hong, HJ Baek… - Scientific Reports, 2023 - nature.com
The exploration of oral microbiome has been increasing due to its relatedness with various
systemic diseases, but standardization of saliva sampling for microbiome analysis has not …

Promising applications of human-derived saliva biomarker testing in clinical diagnostics

M Song, H Bai, P Zhang, X Zhou, B Ying - International Journal of Oral …, 2023 - nature.com
Saliva testing is a vital method for clinical applications, for its noninvasive features, richness
in substances, and the huge amount. Due to its direct anatomical connection with oral …