Recent advances in systems and synthetic biology approaches for developing novel cell-factories in non-conventional yeasts

P Patra, M Das, P Kundu, A Ghosh - Biotechnology Advances, 2021 - Elsevier
Microbial bioproduction of chemicals, proteins, and primary metabolites from cheap carbon
sources is currently an advancing area in industrial research. The model yeast …

Unlocking the magic in mycelium: Using synthetic biology to optimize filamentous fungi for biomanufacturing and sustainability

C Jo, J Zhang, JM Tam, GM Church, AS Khalil… - Materials Today Bio, 2023 - Elsevier
Filamentous fungi drive carbon and nutrient cycling across our global ecosystems, through
its interactions with growing and decaying flora and their constituent microbiomes. The …

Microbial metabolomics: From novel technologies to diversified applications

D Ye, X Li, J Shen, X Xia - TrAC Trends in Analytical Chemistry, 2022 - Elsevier
Microbial metabolomics focuses on the analysis of intracellular or extracellular primary
metabolites, signaling molecules, hormones, and secondary metabolites, and it is an …

[HTML][HTML] Synthetic biology tools for environmental protection

J Aminian-Dehkordi, S Rahimi, M Golzar-Ahmadi… - Biotechnology …, 2023 - Elsevier
Synthetic biology transforms the way we perceive biological systems. Emerging
technologies in this field affect many disciplines of science and engineering. Traditionally …

Metagenome-scale community metabolic modelling for understanding the role of gut microbiota in human health

S Beura, P Kundu, AK Das, A Ghosh - Computers in biology and medicine, 2022 - Elsevier
Metabolic activities of the microbial population are important to maintain the balance of
almost all the ecosystems on earth. In the human gut environment, these microbial …

Genome-scale metabolic network models for industrial microorganisms metabolic engineering: current advances and future prospects

Z Gong, J Chen, X Jiao, H Gong, D Pan, L Liu… - Biotechnology …, 2024 - Elsevier
The construction of high-performance microbial cell factories (MCFs) is the centerpiece of
biomanufacturing. However, the complex metabolic regulatory network of microorganisms …

Importance of carbon to nitrogen ratio in microbial cement production: insights through experiments and genome-scale metabolic modelling

R Murugan, A Sundararaghavan, NK Dhami… - Biochemical …, 2022 - Elsevier
Microbial cement production based on microbially induced calcium carbonate precipitation
(MICP) is a technology with high potential but is economically limited. Lower medium costs …

Unveiling the potential of systems biology in biotechnology and biomedical research

S Saranya, L Thamanna, P Chellapandi - Systems Microbiology and …, 2024 - Springer
Abstract “In silico organisms” are computational genome-scale metabolic models used in
systems and synthetic biology developed by constraint-based metabolic simulations using …

A Systems-Based Approach for Cyanide Overproduction by Bacillus megaterium for Gold Bioleaching Enhancement

J Aminian-Dehkordi, SM Mousavi… - … in Bioengineering and …, 2020 - frontiersin.org
With the constant accumulation of electronic waste, extracting precious metals contained
therein is becoming a major challenge for sustainable development. Bacillus megaterium is …

Evaluation of Different Amino Acids on Growth and Cyanide Production by Bacillus megaterium for Gold Recovery

F Faraji, H Mahandra, A Ghahreman - Sustainability, 2022 - mdpi.com
Bio-cyanidation, as a sustainable and effective method to extract gold from primary and
secondary resources, has attracted attention because of its environmental friendliness and …