CRISPR genotyping methods: tracing the evolution from spoligotyping to machine learning
P Muzyukina, O Soutourina - Biochimie, 2024 - Elsevier
CRISPR (clustered regularly interspaced short palindromic r epeats)-Cas (CRISPR-
associated) systems provide prokaryotes with adaptive immunity defenses against foreign …
associated) systems provide prokaryotes with adaptive immunity defenses against foreign …
The CRISPR-Cas system in Enterobacteriaceae
L Medina-Aparicio, S Davila… - Pathogens and …, 2018 - academic.oup.com
In nature, microorganisms are constantly exposed to multiple viral infections and thus have
developed many strategies to survive phage attack and invasion by foreign DNA. One of …
developed many strategies to survive phage attack and invasion by foreign DNA. One of …
Characterization and Exploitation of CRISPR Loci in Bifidobacterium longum
C Hidalgo-Cantabrana, AB Crawley… - Frontiers in …, 2017 - frontiersin.org
Diverse CRISPR-Cas systems provide adaptive immunity in many bacteria and most
archaea, via a DNA-encoded, RNA-mediated, nucleic-acid targeting mechanism. Over time …
archaea, via a DNA-encoded, RNA-mediated, nucleic-acid targeting mechanism. Over time …
Reemergence of human plague in Yunnan, China in 2016
L Shi, G Yang, Z Zhang, L Xia, Y Liang, H Tan, J He… - PloS one, 2018 - journals.plos.org
The third plague pandemic originated from Yunnan Province, China in the middle of the 19th
century. The last human plague epidemic in Yunnan occurred from 1986–2005. On June 6 …
century. The last human plague epidemic in Yunnan occurred from 1986–2005. On June 6 …
CRISPR Diversity and Microevolution in Clostridium difficile
JM Andersen, M Shoup, C Robinson… - Genome biology and …, 2016 - academic.oup.com
Virulent strains of Clostridium difficile have become a global health problem associated with
morbidity and mortality. Traditional typing methods do not provide ideal resolution to track …
morbidity and mortality. Traditional typing methods do not provide ideal resolution to track …
CRISPR genotyping as complementary tool for epidemiological surveillance of Erwinia amylovora outbreaks
Fire blight is a destructive plant disease caused by Erwinia amylovora affecting pome fruit
trees, and responsible for large yield declines, long phytosanitary confinements, and high …
trees, and responsible for large yield declines, long phytosanitary confinements, and high …
Exploring Diversity and Origins of Streptomycin-Resistant Erwinia amylovora Isolates in New York Through CRISPR Spacer Arrays
KA Tancos, KD Cox - Plant Disease, 2016 - Am Phytopath Society
Streptomycin is the most effective and widely used chemical control in the eastern United
States for blossom blight of apple caused by Erwinia amylovora; however, resistance to this …
States for blossom blight of apple caused by Erwinia amylovora; however, resistance to this …
Whole genome analysis of Yersinia ruckeri isolated over 27 years in Australia and New Zealand reveals geographical endemism over multiple lineages and recent …
AC Barnes, J Delamare-Deboutteville… - Microbial …, 2016 - microbiologyresearch.org
Yersinia ruckeri is a salmonid pathogen with widespread distribution in cool-temperate
waters including Australia and New Zealand, two isolated environments with recently …
waters including Australia and New Zealand, two isolated environments with recently …
[HTML][HTML] A review of methods for subtyping Yersinia pestis: from phenotypes to whole genome sequencing
Numerous subtyping methods have been applied to Yersinia pestis with varying success.
Here, we review the various subtyping methods that have been applied to Y. pestis and their …
Here, we review the various subtyping methods that have been applied to Y. pestis and their …
[HTML][HTML] A concise review on development of probiotics from Lactobacillus using CRISPR-Cas Technology of Gene Editing
Immunological nourishment is the most active part of our health system that plays a crucial
role in the human body's functioning. With the hectic rush of life running at present time …
role in the human body's functioning. With the hectic rush of life running at present time …