Evolutionary profiles and complex admixture landscape in East Asia: New insights from modern and ancient Y chromosome variation perspectives
Z Wang, M Wang, L Hu, G He, S Nie - Heliyon, 2024 - cell.com
Human Y-chromosomes are characterized by nonrecombination and uniparental
inheritance, carrying traces of human history evolution and admixture. Large-scale …
inheritance, carrying traces of human history evolution and admixture. Large-scale …
T2T-YAO: a telomere-to-telomere assembled diploid reference genome for Han Chinese
Y He, Y Chu, S Guo, J Hu, R Li, Y Zheng… - Genomics …, 2023 - academic.oup.com
Since its initial release in 2001, the human reference genome has undergone continuous
improvement in quality, and the recently released telomere-to-telomere (T2T) version—T2T …
improvement in quality, and the recently released telomere-to-telomere (T2T) version—T2T …
Experimental and Computational Approaches to Measure Telomere Length: Recent Advances and Future Directions
Abstract Purpose of Review The length of telomeres, protective structures at the
chromosome ends, is a well-established biomarker for pathological conditions including …
chromosome ends, is a well-established biomarker for pathological conditions including …
Exploring gene content with pangene graphs
Motivation The gene content regulates the biology of an organism. It varies between species
and between individuals of the same species. Although tools have been developed to …
and between individuals of the same species. Although tools have been developed to …
Telomere-to-telomere genome assembly of a male goat reveals variants associated with cashmere traits
H Wu, LY Luo, YH Zhang, CY Zhang, JH Huang… - Nature …, 2024 - nature.com
A complete goat (Capra hircus) reference genome enhances analyses of genetic variation,
thus providing insights into domestication and selection in goats and related species. Here …
thus providing insights into domestication and selection in goats and related species. Here …
Telomere-to-telomere phased genome assembly using HERRO-corrected simplex Nanopore reads
Telomere-to-telomere phased assemblies have become the norm in genomics. To achieve
these for diploid and even polyploid genomes, the contemporary approach involves a …
these for diploid and even polyploid genomes, the contemporary approach involves a …
Telomere-to-telomere assembly by preserving contained reads
Automated telomere-to-telomere (T2T) de novo assembly of diploid and polyploid genomes
remains a formidable task. A string graph is a commonly used assembly graph …
remains a formidable task. A string graph is a commonly used assembly graph …
GCI: a continuity inspector for complete genome assembly
Motivation Recent advances in long-read sequencing technologies have significantly
facilitated the production of high-quality genome assembly. The telomere-to-telomere (T2T) …
facilitated the production of high-quality genome assembly. The telomere-to-telomere (T2T) …
The near-complete genome assembly of hexaploid wild oat reveals its genome evolution and divergence with cultivated oats
Q He, W Li, Y Miao, Y Wang, N Liu, J Liu, T Li, Y Xiao… - Nature Plants, 2024 - nature.com
Avena sterilis, the ancestral species of cultivated oats, is a valuable genetic resource for oat
improvement. Here we generated a near-complete 10.99 Gb A. sterilis genome and a high …
improvement. Here we generated a near-complete 10.99 Gb A. sterilis genome and a high …
[HTML][HTML] 牦牛基因组拷贝数变异研究进展
徐东辉, 徐宇辉, 李瑞哲, 成海建, 马志杰 - 畜牧兽医学报, 2024 - html.rhhz.net
拷贝数变异(copy number variation, CNV) 是基因组结构变异(structural variation, SV)
的重要组成部分. 与SNP (single nucleotide polymorphism) 相比, CNV 显示出更丰富的复杂 …
的重要组成部分. 与SNP (single nucleotide polymorphism) 相比, CNV 显示出更丰富的复杂 …