Quantifying behavior to understand the brain
Over the past years, numerous methods have emerged to automate the quantification of
animal behavior at a resolution not previously imaginable. This has opened up a new field of …
animal behavior at a resolution not previously imaginable. This has opened up a new field of …
How our understanding of memory replay evolves
Memory reactivations and replay, widely reported in the hippocampus and cortex across
species, have been implicated in memory consolidation, planning, and spatial and skill …
species, have been implicated in memory consolidation, planning, and spatial and skill …
Wave-like dopamine dynamics as a mechanism for spatiotemporal credit assignment
Significant evidence supports the view that dopamine shapes learning by encoding reward
prediction errors. However, it is unknown whether striatal targets receive tailored dopamine …
prediction errors. However, it is unknown whether striatal targets receive tailored dopamine …
Rastermap: a discovery method for neural population recordings
Neurophysiology has long progressed through exploratory experiments and chance
discoveries. Anecdotes abound of researchers listening to spikes in real time and noticing …
discoveries. Anecdotes abound of researchers listening to spikes in real time and noticing …
Cortical regulation of two-stage rapid eye movement sleep
Rapid eye movement (REM) sleep is a sleep state characterized by skeletal muscle
paralysis and cerebral cortical activation. Yet, global cortical dynamics and their role in …
paralysis and cerebral cortical activation. Yet, global cortical dynamics and their role in …
The why and how of nonnegative matrix factorization
N Gillis - … , optimization, kernels, and support vector machines, 2014 - books.google.com
Nonnegative matrix factorization (NMF) has become a widely used tool for the analysis of
high-dimensional data as it automatically extracts sparse and meaningful features from a set …
high-dimensional data as it automatically extracts sparse and meaningful features from a set …
A database and deep learning toolbox for noise-optimized, generalized spike inference from calcium imaging
P Rupprecht, S Carta, A Hoffmann, M Echizen… - Nature …, 2021 - nature.com
Inference of action potentials ('spikes') from neuronal calcium signals is complicated by the
scarcity of simultaneous measurements of action potentials and calcium signals ('ground …
scarcity of simultaneous measurements of action potentials and calcium signals ('ground …
Prefrontal cortex exhibits multidimensional dynamic encoding during decision-making
Recent work has suggested that the prefrontal cortex (PFC) plays a key role in context-
dependent perceptual decision-making. In this study, we addressed that role using a new …
dependent perceptual decision-making. In this study, we addressed that role using a new …
Ecological dynamics of the gut microbiome in response to dietary fiber
H Liu, C Liao, L Wu, J Tang, J Chen, C Lei… - The ISME …, 2022 - academic.oup.com
Dietary fibers are generally thought to benefit intestinal health. Their impacts on the
composition and metabolic function of the gut microbiome, however, vary greatly across …
composition and metabolic function of the gut microbiome, however, vary greatly across …
[图书][B] Nonnegative matrix factorization
N Gillis - 2020 - SIAM
Identifying the underlying structure of a data set and extracting meaningful information is a
key problem in data analysis. Simple and powerful methods to achieve this goal are linear …
key problem in data analysis. Simple and powerful methods to achieve this goal are linear …