Robustness of microbiome function
Microbial communities perform metabolic processes that sustain life on Earth and promote
human health. Microbial consortia sustain these functions in the face of constant structural …
human health. Microbial consortia sustain these functions in the face of constant structural …
Modularity of biological systems: a link between structure and function
This paper addresses two topics in systems biology, the hypothesis that biological systems
are modular and the problem of relating structure and function of biological systems. The …
are modular and the problem of relating structure and function of biological systems. The …
Co-occurrence network analysis reveals loss of microbial interactions in anaerobic digester subjected to repeated organic load shocks
JV Mercado, M Koyama, K Nakasaki - Water Research, 2022 - Elsevier
Fluctuations in the anaerobic digestion (AD) organic loading rate (OLR) cause shocks to the
AD microbiome, which lead to unstable methane productivity. Managing these fluctuations …
AD microbiome, which lead to unstable methane productivity. Managing these fluctuations …
Origins and evolution of biological novelty
Understanding the origins and impacts of novel traits has been a perennial interest in many
realms of ecology and evolutionary biology. Here, we build on previous evolutionary and …
realms of ecology and evolutionary biology. Here, we build on previous evolutionary and …
Eco-crossover, or environmentally regulated crossing-over, and natural selection are two irreplaceable drivers of adaptive evolution: Eco-crossover hypothesis
AM Olovnikov - Biosystems, 2022 - Elsevier
The existence of an environmentally regulated version of meiotic crossing-over, or eco-
crossover, is proposed, and the main consequences of this hypothesis are considered. Eco …
crossover, is proposed, and the main consequences of this hypothesis are considered. Eco …
Multivariate selection and the making and breaking of mutational pleiotropy
EI Svensson - Evolutionary Ecology, 2022 - Springer
The role of mutations have been subject to many controversies since the formation of the
Modern Synthesis of evolution in the early 1940ties. Geneticists in the early half of the …
Modern Synthesis of evolution in the early 1940ties. Geneticists in the early half of the …
Temporal variability and cell mechanics control robustness in mammalian embryogenesis
How living systems achieve precision in form and function despite their intrinsic stochasticity
is a fundamental yet ongoing question in biology. We generated morphomaps of …
is a fundamental yet ongoing question in biology. We generated morphomaps of …
Decomposition of Boolean networks: An approach to modularity of biological systems
C Kadelka, R Laubenbacher, D Murrugarra… - arXiv preprint arXiv …, 2022 - arxiv.org
This paper presents the foundation for a decomposition theory for Boolean networks, a type
of discrete dynamical system that has found a wide range of applications in the life sciences …
of discrete dynamical system that has found a wide range of applications in the life sciences …
Morphogens in the evolution of size, shape and patterning
LS Mosby, AE Bowen, Z Hadjivasiliou - Development, 2024 - journals.biologists.com
Much of the striking diversity of life on Earth has arisen from variations in the way that the
same molecules and networks operate during development to shape and pattern tissues …
same molecules and networks operate during development to shape and pattern tissues …
Unifying (simple) models of genetic robustness and evolvability
NB Hardy - bioRxiv, 2024 - biorxiv.org
Simple models, in which genetic robustness is expressed as the probability that a mutation
is neutral, appear to offer disparate views of the relationship between robustness and …
is neutral, appear to offer disparate views of the relationship between robustness and …