The evolutionary significance of polyploidy
Y Van de Peer, E Mizrachi, K Marchal - Nature Reviews Genetics, 2017 - nature.com
Polyploidy, or the duplication of entire genomes, has been observed in prokaryotic and
eukaryotic organisms, and in somatic and germ cells. The consequences of polyploidization …
eukaryotic organisms, and in somatic and germ cells. The consequences of polyploidization …
Evolution of gene duplication in plants
Ancient duplication events and a high rate of retention of extant pairs of duplicate genes
have contributed to an abundance of duplicate genes in plant genomes. These duplicates …
have contributed to an abundance of duplicate genes in plant genomes. These duplicates …
OrthoVenn3: an integrated platform for exploring and visualizing orthologous data across genomes
J Sun, F Lu, Y Luo, L Bie, L Xu… - Nucleic Acids Research, 2023 - academic.oup.com
Advancements in comparative genomics research have led to a growing interest in studying
species evolution and genetic diversity. To facilitate this research, OrthoVenn3 has been …
species evolution and genetic diversity. To facilitate this research, OrthoVenn3 has been …
[HTML][HTML] Dynamic genome evolution in a model fern
The large size and complexity of most fern genomes have hampered efforts to elucidate
fundamental aspects of fern biology and land plant evolution through genome-enabled …
fundamental aspects of fern biology and land plant evolution through genome-enabled …
[HTML][HTML] A reference genome for pea provides insight into legume genome evolution
We report the first annotated chromosome-level reference genome assembly for pea, Gregor
Mendel's original genetic model. Phylogenetics and paleogenomics show genomic …
Mendel's original genetic model. Phylogenetics and paleogenomics show genomic …
[HTML][HTML] The genome of cultivated peanut provides insight into legume karyotypes, polyploid evolution and crop domestication
High oil and protein content make tetraploid peanut a leading oil and food legume. Here we
report a high-quality peanut genome sequence, comprising 2.54 Gb with 20 …
report a high-quality peanut genome sequence, comprising 2.54 Gb with 20 …
The multiple fates of gene duplications: deletion, hypofunctionalization, subfunctionalization, neofunctionalization, dosage balance constraints, and neutral variation
JA Birchler, H Yang - The Plant Cell, 2022 - academic.oup.com
Gene duplications have long been recognized as a contributor to the evolution of genes with
new functions. Multiple copies of genes can result from tandem duplication, from …
new functions. Multiple copies of genes can result from tandem duplication, from …
[HTML][HTML] Gene duplication and evolution in recurring polyploidization–diploidization cycles in plants
Background The sharp increase of plant genome and transcriptome data provide valuable
resources to investigate evolutionary consequences of gene duplication in a range of taxa …
resources to investigate evolutionary consequences of gene duplication in a range of taxa …
Patterns and processes of diploidization in land plants
Most land plants are now known to be ancient polyploids that have rediploidized.
Diploidization involves many changes in genome organization that ultimately restore …
Diploidization involves many changes in genome organization that ultimately restore …
[HTML][HTML] The Brassica oleracea genome reveals the asymmetrical evolution of polyploid genomes
S Liu, Y Liu, X Yang, C Tong, D Edwards… - Nature …, 2014 - nature.com
Polyploidization has provided much genetic variation for plant adaptive evolution, but the
mechanisms by which the molecular evolution of polyploid genomes establishes genetic …
mechanisms by which the molecular evolution of polyploid genomes establishes genetic …