Evolution and diversity of transposable elements in vertebrate genomes
Transposable elements (TEs) are selfish genetic elements that mobilize in genomes via
transposition or retrotransposition and often make up large fractions of vertebrate genomes …
transposition or retrotransposition and often make up large fractions of vertebrate genomes …
What have we learned from the first 500 avian genomes?
GA Bravo, CJ Schmitt… - Annual Review of Ecology …, 2021 - annualreviews.org
The increased capacity of DNA sequencing has significantly advanced our understanding of
the phylogeny of birds and the proximate and ultimate mechanisms molding their genomic …
the phylogeny of birds and the proximate and ultimate mechanisms molding their genomic …
Microchromosomes are building blocks of bird, reptile, and mammal chromosomes
Microchromosomes, once considered unimportant shreds of the chicken genome, are gene-
rich elements with a high GC content and few transposable elements. Their origin has been …
rich elements with a high GC content and few transposable elements. Their origin has been …
[HTML][HTML] Discovery and population genomics of structural variation in a songbird genus
MH Weissensteiner, I Bunikis, A Catalán… - Nature …, 2020 - nature.com
Structural variation (SV) constitutes an important type of genetic mutations providing the raw
material for evolution. Here, we uncover the genome-wide spectrum of intra-and interspecific …
material for evolution. Here, we uncover the genome-wide spectrum of intra-and interspecific …
Bat biology, genomes, and the Bat1K project: to generate chromosome-level genomes for all living bat species
Bats are unique among mammals, possessing some of the rarest mammalian adaptations,
including true self-powered flight, laryngeal echolocation, exceptional longevity, unique …
including true self-powered flight, laryngeal echolocation, exceptional longevity, unique …
Identifying the causes and consequences of assembly gaps using a multiplatform genome assembly of a bird‐of‐paradise
Genome assemblies are currently being produced at an impressive rate by consortia and
individual laboratories. The low costs and increasing efficiency of sequencing technologies …
individual laboratories. The low costs and increasing efficiency of sequencing technologies …
[HTML][HTML] Immune genes are hotspots of shared positive selection across birds and mammals
AJ Shultz, TB Sackton - Elife, 2019 - elifesciences.org
Consistent patterns of positive selection in functionally similar genes can suggest a common
selective pressure across a group of species. We use alignments of orthologous protein …
selective pressure across a group of species. We use alignments of orthologous protein …
[HTML][HTML] Transposable elements in Drosophila
V Mérel, M Boulesteix, M Fablet, C Vieira - Mobile DNA, 2020 - Springer
Drosophila has been studied as a biological model for many years and many discoveries in
biology rely on this species. Research on transposable elements (TEs) is not an exception …
biology rely on this species. Research on transposable elements (TEs) is not an exception …
How complete are “complete” genome assemblies?—An avian perspective
The genomics revolution has led to the sequencing of a large variety of nonmodel
organisms often referred to as “whole” or “complete” genome assemblies. But how complete …
organisms often referred to as “whole” or “complete” genome assemblies. But how complete …
A brief review of vertebrate sex evolution with a pledge for integrative research: towards 'sexomics'
Triggers and biological processes controlling male or female gonadal differentiation vary in
vertebrates, with sex determination (SD) governed by environmental factors or simple to …
vertebrates, with sex determination (SD) governed by environmental factors or simple to …