Textual data compression in computational biology: a synopsis
R Giancarlo, D Scaturro, F Utro - Bioinformatics, 2009 - academic.oup.com
Motivation: Textual data compression, and the associated techniques coming from
information theory, are often perceived as being of interest for data communication and …
information theory, are often perceived as being of interest for data communication and …
Quantifying hidden order out of equilibrium
While the equilibrium properties, states, and phase transitions of interacting systems are well
described by statistical mechanics, the lack of suitable state parameters has hindered the …
described by statistical mechanics, the lack of suitable state parameters has hindered the …
Entropic approach to the detection of crucial events
G Culbreth, BJ West, P Grigolini - Entropy, 2019 - mdpi.com
In this paper, we establish a clear distinction between two processes yielding anomalous
diffusion and 1/f noise. The first process is called Stationary Fractional Brownian Motion …
diffusion and 1/f noise. The first process is called Stationary Fractional Brownian Motion …
Effective symbolic dynamics, random points, statistical behavior, complexity and entropy
We consider the dynamical behavior of Martin-Löf random points in dynamical systems over
metric spaces with a computable dynamics and a computable invariant measure. We use …
metric spaces with a computable dynamics and a computable invariant measure. We use …
Textual data compression in computational biology: Algorithmic techniques
R Giancarlo, D Scaturro, F Utro - Computer Science Review, 2012 - Elsevier
In a recent review [R. Giancarlo, D. Scaturro, F. Utro, Textual data compression in
computational biology: a synopsis, Bioinformatics 25 (2009) 1575–1586] the first systematic …
computational biology: a synopsis, Bioinformatics 25 (2009) 1575–1586] the first systematic …
Information density, structure and entropy in equilibrium and non-equilibrium systems
During a spontaneous change, a macroscopic physical system will evolve towards a macro-
state with more realizations. This observation is at the basis of the statistical mechanical …
state with more realizations. This observation is at the basis of the statistical mechanical …
[PDF][PDF] Data-compression approach to authorship attribution
Authorship attribution is a fascinating field at the crossroad between linguistics and
information science. Its relevance goes much beyond the specific predictions that different …
information science. Its relevance goes much beyond the specific predictions that different …
Algorithmic information dynamics of emergent, persistent, and colliding particles in the game of life
Algorithmic probability is a seminal concept in the theory of algorithmic information. The
concept of algorithmic information dynamics or simply algorithmic dynamics was introduced …
concept of algorithmic information dynamics or simply algorithmic dynamics was introduced …
Complex temporal patterns in molecular dynamics: A direct measure of the phase-space exploration by the trajectory at macroscopic time scales
Computer simulated trajectories of bulk water molecules form complex spatiotemporal
structures at the picosecond time scale. This intrinsic complexity, which underlies the …
structures at the picosecond time scale. This intrinsic complexity, which underlies the …
The Lempel-Ziv complexity of non-stationary chaos in infinite ergodic cases
S Shinkai, Y Aizawa - Progress of theoretical physics, 2006 - academic.oup.com
The large deviation properties of the Lempel-Ziv complexity are studied using a one-
dimensional non-hyperbolic chaos map called the “modified Bernoulli map”, where the …
dimensional non-hyperbolic chaos map called the “modified Bernoulli map”, where the …