Clinically relevant post-translational modification analyses—maturing workflows and bioinformatics tools

D Pascovici, JX Wu, MJ McKay, C Joseph… - International journal of …, 2018 - mdpi.com
Post-translational modifications (PTMs) can occur soon after translation or at any stage in
the lifecycle of a given protein, and they may help regulate protein folding, stability, cellular …

Precursor intensity-based label-free quantification software tools for proteomic and multi-omic analysis within the galaxy platform

S Mehta, CW Easterly, R Sajulga, RJ Millikin… - Proteomes, 2020 - mdpi.com
For mass spectrometry-based peptide and protein quantification, label-free quantification
(LFQ) based on precursor mass peak (MS1) intensities is considered reliable due to its …

Comprehensive proteogenomics identification and validation of cancer associated proteoforms in MCF7 cells

A Yadav - 2018 - ricerca.sns.it
Proteomics investigations rely on reference proteomes for the identification of proteins.
These reference proteomes reflect the proteins that can be produced by an ideal organism …