Discovering and validating cancer genetic dependencies: approaches and pitfalls

A Lin, JM Sheltzer - Nature Reviews Genetics, 2020 - nature.com
Cancer 'genetic dependencies'—genes whose products are essential for cancer cell fitness—
are promising targets for therapeutic development. However, recent evidence has cast doubt …

[HTML][HTML] Functional genomics for cancer drug target discovery

B Haley, F Roudnicky - Cancer Cell, 2020 - cell.com
Functional genomics describes a field of biology that uses a range of approaches for
assessing gene function with high-throughput molecular, genetic, and cellular technologies …

Deconvolution of complex DNA repair (DECODR): establishing a novel deconvolution algorithm for comprehensive analysis of CRISPR-edited sanger sequencing …

K Bloh, R Kanchana, P Bialk, K Banas, Z Zhang… - The CRISPR …, 2021 - liebertpub.com
During CRISPR-directed gene editing, multiple gene repair mechanisms interact to produce
a wide and largely unpredictable variety of sequence changes across an edited population …

Repair of G1 induced DNA double-strand breaks in S-G2/M by alternative NHEJ

W Yu, C Lescale, L Babin, M Bedora-Faure… - Nature …, 2020 - nature.com
The alternative non-homologous end-joining (NHEJ) pathway promotes DNA double-strand
break (DSB) repair in cells deficient for NHEJ or homologous recombination, suggesting that …

CRISPR screens in synthetic lethality and combinatorial therapies for cancer

L Castells-Roca, E Tejero, B Rodriguez-Santiago… - Cancers, 2021 - mdpi.com
Simple Summary The synthetic lethality (SL) clinical success of PARP inhibitors in
homologous recombinant deficient tumors has established a new concept for cancer …

Rational selection of CRISPR-Cas9 guide RNAs for homology-directed genome editing

KJ Tatiossian, RDE Clark, C Huang, ME Thornton… - Molecular Therapy, 2021 - cell.com
Homology-directed repair (HDR) of a DNA break allows copying of genetic material from an
exogenous DNA template and is frequently exploited in CRISPR-Cas9 genome editing …

Tissue specific DNA repair outcomes shape the landscape of genome editing

M Meyenberg, J Ferreira da Silva, JI Loizou - Frontiers in Genetics, 2021 - frontiersin.org
The use of Clustered Regularly Interspaced Short Palindromic Repeats (CRISPR)-Cas9 has
moved from bench to bedside in less than 10years, realising the vision of correcting disease …

Chlamydomonas POLQ is necessary for CRISPR/Cas9-mediated gene targeting

I Sizova, S Kelterborn, V Verbenko, S Kateriya… - G3, 2021 - academic.oup.com
The use of CRISPR/Cas endonucleases has revolutionized gene editing techniques for
research on Chlamydomonas reinhardtii. To better utilize the CRISPR/Cas system, it is …

High-resolution functional mapping of RAD51C by saturation genome editing

R Olvera-León, F Zhang, V Offord, Y Zhao, HK Tan… - Cell, 2024 - cell.com
Pathogenic variants in RAD51C confer an elevated risk of breast and ovarian cancer, while
individuals homozygous for specific RAD51C alleles may develop Fanconi anemia. Using …

Polθ inhibition: An anticancer therapy for HR-deficient tumours

G Barszczewska-Pietraszek, M Drzewiecka… - International Journal of …, 2022 - mdpi.com
DNA polymerase theta (Polθ)-mediated end joining (TMEJ) is, along with homologous
recombination (HR) and non-homologous end-joining (NHEJ), one of the most important …