Computational protein design for COVID-19 research and emerging therapeutics
As the world struggles with the ongoing COVID-19 pandemic, unprecedented obstacles
have continuously been traversed as new SARS-CoV-2 variants continually emerge …
have continuously been traversed as new SARS-CoV-2 variants continually emerge …
Binding interactions between receptor-binding domain of spike protein and human angiotensin converting enzyme-2 in omicron variant
B Jawad, P Adhikari, R Podgornik… - The journal of physical …, 2022 - ACS Publications
The emergence of new SARS-CoV-2 Omicron variant of concern (OV) has exacerbated the
COVID-19 pandemic because of a large number of mutations in the spike protein …
COVID-19 pandemic because of a large number of mutations in the spike protein …
Towards quantum-chemical level calculations of SARS-CoV-2 spike protein variants of concern by first principles density functional theory
The spike protein (S-protein) is a crucial part of the severe acute respiratory syndrome
coronavirus 2 (SARS-CoV-2), with its many domains responsible for binding, fusion, and …
coronavirus 2 (SARS-CoV-2), with its many domains responsible for binding, fusion, and …
Mutations of Omicron variant at the interface of the receptor domain motif and human angiotensin-converting enzyme-2
P Adhikari, B Jawad, R Podgornik… - International journal of …, 2022 - mdpi.com
The most recent Omicron variant of SARS-CoV-2 has caused global concern and anxiety.
The only thing certain about this strain, with a large number of mutations in the spike protein …
The only thing certain about this strain, with a large number of mutations in the spike protein …
Effect of Delta and Omicron mutations on the RBD-SD1 domain of the spike protein in SARS-CoV-2 and the Omicron mutations on RBD-ACE2 interface complex
WY Ching, P Adhikari, B Jawad… - International Journal of …, 2022 - mdpi.com
The receptor-binding domain (RBD) is the essential part in the Spike-protein (S-protein) of
SARS-CoV-2 virus that directly binds to the human ACE2 receptor, making it a key target for …
SARS-CoV-2 virus that directly binds to the human ACE2 receptor, making it a key target for …
Impact of BA. 1, BA. 2, and BA. 4/BA. 5 Omicron mutations on therapeutic monoclonal antibodies
The emergence of Omicron SARS-CoV-2 subvariants (BA. 1, BA. 2, BA. 4, and BA. 5), with
an unprecedented number of mutations in their receptor-binding domain (RBD) of the spike …
an unprecedented number of mutations in their receptor-binding domain (RBD) of the spike …
MicroRNAs as potential tools for predicting cancer patients' susceptibility to SARS-CoV-2 infection and vaccination response
TR Dias, F Dias, AL Teixeira, H Sousa, J Oliveira… - Cells, 2022 - mdpi.com
Coronavirus disease (COVID-19) is an infectious disease that is caused by a highly
contagious and severe acute respiratory syndrome—coronavirus 2 (SARS-CoV-2). This …
contagious and severe acute respiratory syndrome—coronavirus 2 (SARS-CoV-2). This …
Quantum chemical computation of omicron mutations near cleavage sites of the spike protein
The attachment of the spike protein in SARS-CoV-2 to host cells and the initiation of viral
invasion are two critical processes in the viral infection and transmission in which the …
invasion are two critical processes in the viral infection and transmission in which the …
[HTML][HTML] Development of highly effective LCB1-based lipopeptides targeting the spike receptor-binding motif of SARS-CoV-2
Y Zhu, M Li, N Liu, T Wu, X Han, G Zhao, Y He - Antiviral Research, 2023 - Elsevier
LCB1 is a computationally designed 56-mer miniprotein targeting the spike (S) receptor-
binding motif of SARS-CoV-2 with high potent activity (Science, 2020; Cell host microbe …
binding motif of SARS-CoV-2 with high potent activity (Science, 2020; Cell host microbe …
A Multi-Faceted Binding Assessment of Aptamers Targeting the SARS-CoV-2 Spike Protein
L Civit, N Moradzadeh, A Jonczyk… - International Journal of …, 2024 - mdpi.com
The COVID-19 pandemic has underscored the critical need for the advancement of
diagnostic and therapeutic platforms. These platforms rely on the rapid development of …
diagnostic and therapeutic platforms. These platforms rely on the rapid development of …