Applicability and interpretability of Ward's hierarchical agglomerative clustering with or without contiguity constraints
N Randriamihamison, N Vialaneix, P Neuvial - Journal of Classification, 2021 - Springer
Hierarchical agglomerative clustering (HAC) with Ward's linkage has been widely used
since its introduction by Ward (Journal of the American Statistical Association, 58 (301), 236 …
since its introduction by Ward (Journal of the American Statistical Association, 58 (301), 236 …
Population genomics meets the taxonomy of cyanobacteria
The emergence of cyanobacterial species (speciation) is driven by mutation, selection, gene
flow, and geographical and ecological isolation. Population genomics explores the process …
flow, and geographical and ecological isolation. Population genomics explores the process …
[HTML][HTML] Genomic prediction accuracy using haplotypes defined by size and hierarchical clustering based on linkage disequilibrium
S Won, JE Park, JH Son, SH Lee, BH Park… - Frontiers in …, 2020 - frontiersin.org
Genomic prediction is an effective way to estimate the genomic breeding values from
genetic information based on statistical methods such as best linear unbiased prediction …
genetic information based on statistical methods such as best linear unbiased prediction …
Large-scale name disambiguation of Chinese patent inventors (1985–2016)
This study presents the first systematic disambiguation result of Chinese patent inventors in
State Intellectual Property Office of China patent database from 1985 to 2016. With a list of …
State Intellectual Property Office of China patent database from 1985 to 2016. With a list of …
Contributions to statistical inference from genomic data
P Neuvial - 2020 - theses.hal.science
This thesis summarizes my research contributions to the development, mathematical study,
and application of statistical models and methods that take advantage of the complexity and …
and application of statistical models and methods that take advantage of the complexity and …
Structured Compression of Genetic Information and Genome‐Wide Association Study by Additive Models
F GUINOT, M SZAFRANSKI… - … Computer and Statistical …, 2024 - Wiley Online Library
In this chapter, the authors look into the context of genome‐wide association studies and the
reference tools used to detect associations between a genotype and a phenotype. They …
reference tools used to detect associations between a genotype and a phenotype. They …
[HTML][HTML] Haplotype analysis of genomic prediction by incorporating genomic pathway information based on high-density SNP marker in Chinese yellow-feathered …
H Ye, Z Xu, SF Bello, Q Zhu, S Kong, M Zheng, X Fang… - Poultry Science, 2023 - Elsevier
Genomic selection using single nucleotide polymorphism (SNP) markers is now intensively
investigated in breeding and has been widely utilized for genetic improvement. Currently …
investigated in breeding and has been widely utilized for genetic improvement. Currently …
[PDF][PDF] Classification ascendante hiérarchique, contrainte d'ordre: conditions d'applicabilité, interprétabilité des dendrogrammes
N Randriamihamison, P Neuvial… - Institut de …, 2019 - sombrero.nathalievialaneix.eu
Résumé La classification ascendante hiérarchique (CAH) avec lien de Ward est une
approche fréquemment utilisée pour partitionner des objets d'un espace multi-dimensionnel …
approche fréquemment utilisée pour partitionner des objets d'un espace multi-dimensionnel …
Classification Ascendante Hiérarchique sous Contrainte de Contiguïté pour l'Analyse de données Hi-C
N Randriamihamison - 2021 - theses.hal.science
L'organisation spatiale du génome à l'intérieur du noyau des cellules a un impact majeur sur
la régulation de l'expression des gènes, avec notamment des implications importantes dans …
la régulation de l'expression des gènes, avec notamment des implications importantes dans …
[PDF][PDF] Package 'adjclust'
Description Implements a constrained version of hierarchical agglomerative clustering, in
which each observation is associated to a position, and only adjacent clusters can be …
which each observation is associated to a position, and only adjacent clusters can be …