[HTML][HTML] Metagenomics reshapes the concepts of RNA virus evolution by revealing extensive horizontal virus transfer

VV Dolja, EV Koonin - Virus research, 2018 - Elsevier
Virus metagenomics is a young research filed but it has already transformed our
understanding of virus diversity and evolution, and illuminated at a new level the …

The eukaryotic tree of life from a global phylogenomic perspective

F Burki - Cold Spring Harbor perspectives in biology, 2014 - cshperspectives.cshlp.org
Molecular phylogenetics has revolutionized our knowledge of the eukaryotic tree of life. With
the advent of genomics, a new discipline of phylogenetics has emerged: phylogenomics …

The SILVA and “all-species living tree project (LTP)” taxonomic frameworks

P Yilmaz, LW Parfrey, P Yarza, J Gerken… - Nucleic acids …, 2014 - academic.oup.com
SILVA (from Latin silva, forest, http://www. arb-silva. de) is a comprehensive resource for up-
to-date quality-controlled databases of aligned ribosomal RNA (rRNA) gene sequences from …

[HTML][HTML] A higher level classification of all living organisms

MA Ruggiero, DP Gordon, TM Orrell, N Bailly… - PloS one, 2015 - journals.plos.org
We present a consensus classification of life to embrace the more than 1.6 million species
already provided by more than 3,000 taxonomists' expert opinions in a unified and coherent …

[HTML][HTML] The all-data-based evolutionary hypothesis of ciliated protists with a revised classification of the phylum Ciliophora (Eukaryota, Alveolata)

F Gao, A Warren, Q Zhang, J Gong, M Miao, P Sun… - Scientific Reports, 2016 - nature.com
The phylum Ciliophora plays important roles in a wide range of biological studies. However,
the evolutionary relationships of many groups remain unclear due to a lack of sufficient …

[图书][B] The biology and ecology of giant kelp forests

DR Schiel, MS Foster - 2015 - books.google.com
The largest seaweed, giant kelp (Macrocystis) is the fastest growing and most prolific of all
plants found on earth. Growing from the seafloor and extending along the ocean surface in …

Structure, regulation and evolution of Nox‐family NADPH oxidases that produce reactive oxygen species

H Sumimoto - The FEBS journal, 2008 - Wiley Online Library
NADPH oxidases of the Nox family exist in various supergroups of eukaryotes but not in
prokaryotes, and play crucial roles in a variety of biological processes, such as host defense …

[HTML][HTML] The puzzle of plastid evolution

JM Archibald - Current Biology, 2009 - cell.com
A comprehensive understanding of the origin and spread of plastids remains an important
yet elusive goal in the field of eukaryotic evolution. Combined with the discovery of new …

Phylogenomic analyses support the monophyly of Excavata and resolve relationships among eukaryotic “supergroups”

V Hampl, L Hug, JW Leigh, JB Dacks… - Proceedings of the …, 2009 - National Acad Sciences
Nearly all of eukaryotic diversity has been classified into 6 suprakingdom-level groups
(supergroups) based on molecular and morphological/cell-biological evidence; these are …

[HTML][HTML] The origin and early evolution of eukaryotes in the light of phylogenomics

EV Koonin - Genome biology, 2010 - Springer
The origin and early evolution of eukaryotes in the light of phylogenomics | Genome Biology
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