Variation in genomic landscape of clear cell renal cell carcinoma across Europe

G Scelo, Y Riazalhosseini, L Greger… - Nature …, 2014 - nature.com
The incidence of renal cell carcinoma (RCC) is increasing worldwide, and its prevalence is
particularly high in some parts of Central Europe. Here we undertake whole-genome and …

Exploring DNA Damage and Repair Mechanisms: A Review with Computational Insights

J Chen, R Potlapalli, H Quan, L Chen, Y Xie… - BioTech, 2024 - mdpi.com
DNA damage is a critical factor contributing to genetic alterations, directly affecting human
health, including developing diseases such as cancer and age-related disorders. DNA …

LabKey Server: an open source platform for scientific data integration, analysis and collaboration

EK Nelson, B Piehler, J Eckels, A Rauch, M Bellew… - BMC …, 2011 - Springer
Background Broad-based collaborations are becoming increasingly common among
disease researchers. For example, the Global HIV Enterprise has united cross-disciplinary …

The first RSBI (ISA-TAB) workshop:“can a simple format work for complex studies?”

SA Sansone, P Rocca-Serra, M Brandizi… - OMICS A Journal of …, 2008 - liebertpub.com
This article summarizes the motivation for, and the proceedings of, the first ISA-TAB
workshop held December 6–8, 2007, at the EBI, Cambridge, UK. This exploratory workshop …

Handheld computers for self-administered sensitive data collection: a comparative study in Peru

A Bernabe-Ortiz, WH Curioso, MA Gonzales… - BMC medical informatics …, 2008 - Springer
Background Low-cost handheld computers (PDA) potentially represent an efficient tool for
collecting sensitive data in surveys. The goal of this study is to evaluate the quality of sexual …

The BioSample database (BioSD) at the european bioinformatics institute

M Gostev, A Faulconbridge, M Brandizi… - Nucleic acids …, 2012 - academic.oup.com
Abstract The BioSample Database (http://www. ebi. ac. uk/biosamples) is a new database at
EBI that stores information about biological samples used in molecular experiments, such as …

Organization of biomedical data for collaborative scientific research: A research information management system

S Myneni, VL Patel - International journal of information management, 2010 - Elsevier
Biomedical researchers often work with massive, detailed and heterogeneous datasets.
These datasets raise new challenges of information organization and management for …

Some principles and practices of genetic biobanking studies

AK Macleod, DCM Liewald… - European …, 2009 - Eur Respiratory Soc
Genetic biobanking studies are becoming increasingly common as researchers recognise
the need for large samples to identify the genetic basis of susceptibility to complex disease …

SLIMS—a user-friendly sample operations and inventory management system for genotyping labs

T Van Rossum, B Tripp, D Daley - Bioinformatics, 2010 - academic.oup.com
We present the Sample-based Laboratory Information Management System (SLIMS), a
powerful and user-friendly open source web application that provides all members of a …

A system for information management in biomedical studies—SIMBioMS

M Krestyaninova, A Zarins, J Viksna, N Kurbatova… - …, 2009 - academic.oup.com
SIMBioMS is a web-based open source software system for managing data and information
in biomedical studies. It provides a solution for the collection, storage, management and …