The biogeochemistry of marine polysaccharides: sources, inventories, and bacterial drivers of the carbohydrate cycle

C Arnosti, M Wietz, T Brinkhoff… - Annual Review of …, 2021 - annualreviews.org
Polysaccharides are major components of macroalgal and phytoplankton biomass and
constitute a large fraction of the organic matter produced and degraded in the ocean. Until …

Prokaryotic life in the deep ocean's water column

GJ Herndl, B Bayer, F Baltar… - Annual Review of …, 2023 - annualreviews.org
The oceanic waters below a depth of 200 m represent, in terms of volume, the largest habitat
of the biosphere, harboring approximately 70% of the prokaryotic biomass in the oceanic …

[HTML][HTML] Global marine microbial diversity and its potential in bioprospecting

J Chen, Y Jia, Y Sun, K Liu, C Zhou, C Liu, D Li, G Liu… - Nature, 2024 - nature.com
The past two decades has witnessed a remarkable increase in the number of microbial
genomes retrieved from marine systems,. However, it has remained challenging to translate …

[HTML][HTML] Niche differentiation of microbial community shapes vertical distribution of recalcitrant dissolved organic matter in deep-sea sediments

X Chen, R Cai, X Zhuo, Q Chen, C He, J Sun… - Environment …, 2023 - Elsevier
Sedimentary organic matter provides carbon substrates and energy sources for
microorganisms, which drive benthic biogeochemical processes and in turn modify the …

The OceanDNA MAG catalog contains over 50,000 prokaryotic genomes originated from various marine environments

Y Nishimura, S Yoshizawa - Scientific Data, 2022 - nature.com
Marine microorganisms are immensely diverse and play fundamental roles in global
geochemical cycling. Recent metagenome-assembled genome studies, with particular …

Cultivation of marine bacteria of the SAR202 clade

Y Lim, JH Seo, SJ Giovannoni, I Kang… - Nature …, 2023 - nature.com
Bacteria of the SAR202 clade, within the phylum Chloroflexota, are ubiquitously distributed
in the ocean but have not yet been cultivated in the lab. It has been proposed that ancient …

Microbial diversity and co-occurrence patterns in deep soils contaminated by polycyclic aromatic hydrocarbons (PAHs)

S Geng, W Cao, J Yuan, Y Wang, Y Guo, A Ding… - Ecotoxicology and …, 2020 - Elsevier
Highlights•Edaphic factors and ecological function drove the assembly of microbial
communities.•Edaphic nutrients and pH exerted the primary influence on soil …

Novel Chloroflexi genomes from the deepest ocean reveal metabolic strategies for the adaptation to deep-sea habitats

R Liu, X Wei, W Song, L Wang, J Cao, J Wu, T Thomas… - Microbiome, 2022 - Springer
Background The deep sea harbors the majority of the microbial biomass in the ocean and is
a key site for organic matter (OM) remineralization and storage in the biosphere. Microbial …

Temperature impacts community structure and function of phototrophic Chloroflexi and Cyanobacteria in two alkaline hot springs in Yellowstone National Park

AC Bennett, SK Murugapiran… - Environmental …, 2020 - Wiley Online Library
Photosynthetic bacteria are abundant in alkaline, terrestrial hot springs and there is a long
history of research on phototrophs in Yellowstone National Park (YNP). Hot springs provide …

Prediction of lung cancer using novel biomarkers based on microbiome profiling of bronchoalveolar lavage fluid

G Kim, C Park, YK Yoon, D Park, JE Lee, D Lee… - Scientific Reports, 2024 - nature.com
There is an unmet need for biomarkers for the diagnosis of lung cancer and decision criteria
for lung biopsy. We comparatively investigated the lung microbiomes of patients with lung …