RNA polymerases I and III in development and disease

KEN Watt, J Macintosh, G Bernard… - Seminars in cell & …, 2023 - Elsevier
Ribosomes are macromolecular machines that are globally required for the translation of all
proteins in all cells. Ribosome biogenesis, which is essential for cell growth, proliferation …

RNA modifications and RNA metabolism in neurological disease pathogenesis

B Chatterjee, CKJ Shen, P Majumder - International journal of molecular …, 2021 - mdpi.com
The intrinsic cellular heterogeneity and molecular complexity of the mammalian nervous
system relies substantially on the dynamic nature and spatiotemporal patterning of gene …

Genetic identification of brain cell types underlying schizophrenia

NG Skene, J Bryois, TE Bakken, G Breen, JJ Crowley… - Nature …, 2018 - nature.com
With few exceptions, the marked advances in knowledge about the genetic basis of
schizophrenia have not converged on findings that can be confidently used for precise …

[HTML][HTML] Tumor-derived exosomal microRNA-106b-5p activates EMT-cancer cell and M2-subtype TAM interaction to facilitate CRC metastasis

C Yang, R Dou, C Wei, K Liu, D Shi, C Zhang, Q Liu… - Molecular Therapy, 2021 - cell.com
Epithelial-mesenchymal transition (EMT) is reported to involve in the crosstalk between
tumor cells and tumor-associated macrophages (TAMs). Exosomes are considered as …

miR-195-5p/NOTCH2-mediated EMT modulates IL-4 secretion in colorectal cancer to affect M2-like TAM polarization

X Lin, S Wang, M Sun, C Zhang, C Wei, C Yang… - Journal of hematology & …, 2019 - Springer
Background Tumor microenvironment (TME) is a complex environment containing tumor
cells, tumor-associated macrophages (TAMs), interstitial cells, and non-cellular components …

dynGENIE3: dynamical GENIE3 for the inference of gene networks from time series expression data

VA Huynh-Thu, P Geurts - Scientific reports, 2018 - nature.com
The elucidation of gene regulatory networks is one of the major challenges of systems
biology. Measurements about genes that are exploited by network inference methods are …

A neural m6A/Ythdf pathway is required for learning and memory in Drosophila

L Kan, S Ott, B Joseph, ES Park, W Dai… - Nature …, 2021 - nature.com
Epitranscriptomic modifications can impact behavior. Here, we used Drosophila
melanogaster to study N6-methyladenosine (m6A), the most abundant modification of …

Osmium‐mediated transformation of 4‐thiouridine to cytidine as key to study RNA dynamics by sequencing

C Riml, T Amort, D Rieder, C Gasser… - Angewandte Chemie …, 2017 - Wiley Online Library
To understand the functional roles of RNA in the cell, it is essential to elucidate the dynamics
of their production, processing and decay. A recent method for assessing mRNA dynamics is …

Attenuated codon optimality contributes to neural-specific mRNA decay in Drosophila

DA Burow, S Martin, JF Quail, N Alhusaini, J Coller… - Cell reports, 2018 - cell.com
Tissue-specific mRNA stability is important for cell fate and physiology, but the mechanisms
involved are not fully understood. We found that zygotic mRNA stability in Drosophila …

Combined modelling of mRNA decay dynamics and single-molecule imaging in the Drosophila embryo uncovers a role for P-bodies in 5′ to 3′ degradation

L Forbes Beadle, JC Love, Y Shapovalova… - PLoS …, 2023 - journals.plos.org
Regulation of mRNA degradation is critical for a diverse array of cellular processes and
developmental cell fate decisions. Many methods for determining mRNA half-lives rely on …