Animal functional magnetic resonance imaging: trends and path toward standardization

F Mandino, DH Cerri, CM Garin, M Straathof… - Frontiers in …, 2020 - frontiersin.org
Animal whole-brain functional magnetic resonance imaging (fMRI) provides a non-invasive
window into brain activity. A collection of associated methods aims to replicate observations …

Current analysis of hypoxic-ischemic encephalopathy research issues and future treatment modalities

HQ She, YF Sun, L Chen, QX Xiao, BY Luo… - Frontiers in …, 2023 - frontiersin.org
Hypoxic-ischemic encephalopathy (HIE) is the leading cause of long-term neurological
disability in neonates and adults. Through bibliometric analysis, we analyzed the current …

Whole-brain mapping of effective connectivity by fMRI with cortex-wide patterned optogenetics

S Kim, HS Moon, TT Vo, CH Kim, GH Im, S Lee, M Choi… - Neuron, 2023 - cell.com
Functional magnetic resonance imaging (fMRI) with optogenetic neural manipulation is a
powerful tool that enables brain-wide mapping of effective functional networks. To achieve …

Chronic cranial windows for long term multimodal neurovascular imaging in mice

K Kılıç, M Desjardins, J Tang, M Thunemann… - Frontiers in …, 2021 - frontiersin.org
Chronic cranial windows allow for longitudinal brain imaging experiments in awake,
behaving mice. Different imaging technologies have their unique advantages and …

Fetal programming of human energy homeostasis brain networks: issues and considerations

JM Rasmussen, PM Thompson, S Entringer… - Obesity …, 2022 - Wiley Online Library
In this paper, we present a transdisciplinary framework and testable hypotheses regarding
the process of fetal programming of energy homeostasis brain circuitry. Our model proposes …

MRI-guided robotic arm drives optogenetic fMRI with concurrent Ca2+ recording

Y Chen, P Pais-Roldan, X Chen, MH Frosz… - Nature …, 2019 - nature.com
Optical fiber-mediated optogenetic activation and neuronal Ca2+ recording in combination
with fMRI provide a multi-modal fMRI platform. Here, we developed an MRI-guided robotic …

MEG source imaging detects optogenetically-induced activity in cortical and subcortical networks

GE Alberto, JR Stapleton-Kotloski, DC Klorig… - Nature …, 2021 - nature.com
Magnetoencephalography measures neuromagnetic activity with high temporal, and
theoretically, high spatial resolution. We developed an experimental platform combining …

The hidden brain: uncovering previously overlooked brain regions by employing novel preclinical unbiased network approaches

S Simpson, Y Chen, E Wellmeyer, LC Smith… - Frontiers in Systems …, 2021 - frontiersin.org
A large focus of modern neuroscience has revolved around preselected brain regions of
interest based on prior studies. While there are reasons to focus on brain regions implicated …

Optical intrinsic signal imaging with optogenetics reveals functional cortico-cortical connectivity at the columnar level in living macaques

Y Nakamichi, K Okubo, T Sato, M Hashimoto… - Scientific Reports, 2019 - nature.com
Despite extensive research on primate cognitive function, understanding how anatomical
connectivity at a neural circuit level relates to information transformation across different …

NOise Reduction with DIstribution Corrected (NORDIC) principal component analysis improves brain activity detection across rodent and human functional MRI …

RW Chan, G Hamilton-Fletcher, BJ Edelman… - Imaging …, 2024 - direct.mit.edu
Abstract NOise Reduction with DIstribution Corrected (NORDIC) principal component
analysis (PCA) has been shown to selectively suppress thermal noise and improve the …