Multi-omic profiling of the developing human cerebral cortex at the single-cell level

K Zhu, J Bendl, S Rahman, JM Vicari, C Coleman… - Science …, 2023 - science.org
The cellular complexity of the human brain is established via dynamic changes in gene
expression throughout development that is mediated, in part, by the spatiotemporal activity …

The three-dimensional landscape of cortical chromatin accessibility in Alzheimer's disease

J Bendl, ME Hauberg, K Girdhar, E Im, JM Vicari… - Nature …, 2022 - nature.com
To characterize the dysregulation of chromatin accessibility in Alzheimer's disease (AD), we
generated 636 ATAC-seq libraries from neuronal and nonneuronal nuclei isolated from the …

Chromatin domain alterations linked to 3D genome organization in a large cohort of schizophrenia and bipolar disorder brains

K Girdhar, GE Hoffman, J Bendl, S Rahman… - Nature …, 2022 - nature.com
Chromosomal organization, scaling from the 147-base pair (bp) nucleosome to megabase-
ranging domains encompassing multiple transcriptional units, including heritability loci for …

Transcriptome and chromatin accessibility landscapes across 25 distinct human brain regions expand the susceptibility gene set for neuropsychiatric disorders

P Dong, J Bendl, R Misir, Z Shao, J Edelstien, DA Davis… - BioRxiv, 2022 - biorxiv.org
Brain region-and cell-specific transcriptomic and epigenomic molecular features are
associated with heritability for neuropsychiatric traits, but a systematic view, considering …