The population genetics of pathogenic Escherichia coli

E Denamur, O Clermont, S Bonacorsi… - Nature Reviews …, 2021 - nature.com
Escherichia coli is a commensal of the vertebrate gut that is increasingly involved in various
intestinal and extra-intestinal infections as an opportunistic pathogen. Numerous pathotypes …

[HTML][HTML] Virulence Factors of Enteric Pathogenic Escherichia coli: A Review

B Pakbin, WM Brück, JWA Rossen - International journal of molecular …, 2021 - mdpi.com
Escherichia coli are remarkably versatile microorganisms and important members of the
normal intestinal microbiota of humans and animals. This harmless commensal organism …

[HTML][HTML] The Diversity of Escherichia coli Pathotypes and Vaccination Strategies against This Versatile Bacterial Pathogen

P Pokharel, S Dhakal, CM Dozois - Microorganisms, 2023 - mdpi.com
Escherichia coli (E. coli) is a gram-negative bacillus and resident of the normal intestinal
microbiota. However, some E. coli strains can cause diseases in humans, other mammals …

Diversity within species: interpreting strains in microbiomes

T Van Rossum, P Ferretti, OM Maistrenko… - Nature Reviews …, 2020 - nature.com
Studying within-species variation has traditionally been limited to culturable bacterial
isolates and low-resolution microbial community fingerprinting. Metagenomic sequencing …

Genomics and pathotypes of the many faces of Escherichia coli

J Geurtsen, M de Been, E Weerdenburg… - FEMS microbiology …, 2022 - academic.oup.com
Escherichia coli is the most researched microbial organism in the world. Its varied impact on
human health, consisting of commensalism, gastrointestinal disease, or extraintestinal …

Environmental Escherichia coli: ecology and public health implications—a review

J Jang, HG Hur, MJ Sadowsky… - Journal of applied …, 2017 - academic.oup.com
Escherichia coli is classified as a rod‐shaped, Gram‐negative bacterium in the family
Enterobacteriaceae. The bacterium mainly inhabits the lower intestinal tract of warm …

ClermonTyping: an easy-to-use and accurate in silico method for Escherichia genus strain phylotyping

J Beghain, A Bridier-Nahmias… - Microbial …, 2018 - microbiologyresearch.org
The genus Escherichia is composed of Escherichia albertii, E. fergusonii, five cryptic
Escherichia clades and E. coli sensu stricto. Furthermore, the E. coli species can be divided …

[HTML][HTML] Escherichia coli Mastitis in Dairy Cattle: Etiology, Diagnosis, and Treatment Challenges

DB Goulart, M Mellata - Frontiers in Microbiology, 2022 - frontiersin.org
Bovine mastitis is an inflammation of the udder tissue parenchyma that causes pathological
changes in the glandular tissue and abnormalities in milk leading to significant economic …

Mechanisms and consequences of intestinal dysbiosis

GA Weiss, T Hennet - Cellular and Molecular Life Sciences, 2017 - Springer
The composition of the gut microbiota is in constant flow under the influence of factors such
as the diet, ingested drugs, the intestinal mucosa, the immune system, and the microbiota …

Adherent-invasive Escherichia coli in inflammatory bowel disease

C Palmela, C Chevarin, Z Xu, J Torres, G Sevrin… - Gut, 2018 - gut.bmj.com
Intestinal microbiome dysbiosis has been consistently described in patients with IBD. In the
last decades, Escherichia coli, and the adherent-invasive E coli (AIEC) pathotype in …