Allosteric sites: remote control in regulation of protein activity
E Guarnera, IN Berezovsky - Current opinion in structural biology, 2016 - Elsevier
Highlights•Prediction and characterization of allosteric sites.•Protein dynamics is the basis of
allosteric communication.•Theoretical models, experimental verification, and challenges in …
allosteric communication.•Theoretical models, experimental verification, and challenges in …
Essential role of conformational selection in ligand binding
Two competing and mutually exclusive mechanisms of ligand recognition–conformational
selection and induced fit–have dominated our interpretation of ligand binding in biological …
selection and induced fit–have dominated our interpretation of ligand binding in biological …
Unraveling structural mechanisms of allosteric drug action
R Nussinov, CJ Tsai - Trends in pharmacological sciences, 2014 - cell.com
Orthosteric drugs block the active site to obstruct function; allosteric drugs modify the
population of the active state, to modulate function. Available data lead us to propose that …
population of the active state, to modulate function. Available data lead us to propose that …
Signaling through dynamic linkers as revealed by PKA
M Akimoto, R Selvaratnam… - Proceedings of the …, 2013 - National Acad Sciences
Protein kinase A (PKA) is a prototype of multidomain signaling proteins functioning as
allosteric conformational switches. Allosteric transitions have been the subject of extensive …
allosteric conformational switches. Allosteric transitions have been the subject of extensive …
[HTML][HTML] Reversing allosteric communication: From detecting allosteric sites to inducing and tuning targeted allosteric response
The omnipresence of allosteric regulation together with the fundamental role of structural
dynamics in this phenomenon have initiated a great interest to the detection of regulatory …
dynamics in this phenomenon have initiated a great interest to the detection of regulatory …
Allostery through the computational microscope: cAMP activation of a canonical signalling domain
RD Malmstrom, AP Kornev, SS Taylor… - Nature …, 2015 - nature.com
Ligand-induced protein allostery plays a central role in modulating cellular signalling
pathways. Here using the conserved cyclic nucleotide-binding domain of protein kinase A's …
pathways. Here using the conserved cyclic nucleotide-binding domain of protein kinase A's …
Advances in NMR methods to map allosteric sites: from models to translation
S Boulton, G Melacini - Chemical Reviews, 2016 - ACS Publications
The last five years have witnessed major developments in the understanding of the allosteric
phenomenon, broadly defined as coupling between remote molecular sites. Such advances …
phenomenon, broadly defined as coupling between remote molecular sites. Such advances …
A mechanism for the auto-inhibition of hyperpolarization-activated cyclic nucleotide-gated (HCN) channel opening and its relief by cAMP
Hyperpolarization-activated cyclic nucleotide-gated (HCN) ion channels control neuronal
and cardiac electrical rhythmicity. There are four homologous isoforms (HCN1–4) sharing a …
and cardiac electrical rhythmicity. There are four homologous isoforms (HCN1–4) sharing a …
A tool set to map allosteric networks through the NMR chemical shift covariance analysis
Allostery is an essential regulatory mechanism of biological function. Allosteric sites are also
pharmacologically relevant as they are often targeted with higher selectivity than orthosteric …
pharmacologically relevant as they are often targeted with higher selectivity than orthosteric …
PKA-RII subunit phosphorylation precedes activation by cAMP and regulates activity termination
J Isensee, M Kaufholz, MJ Knape, J Hasenauer… - Journal of Cell …, 2018 - rupress.org
Type II isoforms of cyclic adenosine monophosphate (cAMP)–dependent protein kinase A
(PKA-II) contain a phosphorylatable epitope within the inhibitory domain of RII subunits …
(PKA-II) contain a phosphorylatable epitope within the inhibitory domain of RII subunits …