Recent advances in 2D and 3D in vitro systems using primary hepatocytes, alternative hepatocyte sources and non-parenchymal liver cells and their use in …
P Godoy, NJ Hewitt, U Albrecht, ME Andersen… - Archives of …, 2013 - Springer
This review encompasses the most important advances in liver functions and hepatotoxicity
and analyzes which mechanisms can be studied in vitro. In a complex architecture of nested …
and analyzes which mechanisms can be studied in vitro. In a complex architecture of nested …
Combinatorial drug therapy for cancer in the post-genomic era
B Al-Lazikani, U Banerji, P Workman - Nature biotechnology, 2012 - nature.com
Over the past decade, whole genome sequencing and other'omics' technologies have
defined pathogenic driver mutations to which tumor cells are addicted. Such addictions …
defined pathogenic driver mutations to which tumor cells are addicted. Such addictions …
Boolean modeling in systems biology: an overview of methodology and applications
Mathematical modeling of biological processes provides deep insights into complex cellular
systems. While quantitative and continuous models such as differential equations have been …
systems. While quantitative and continuous models such as differential equations have been …
Conceptual evolution of cell signaling
A Nair, P Chauhan, B Saha, KF Kubatzky - International journal of …, 2019 - mdpi.com
During the last 100 years, cell signaling has evolved into a common mechanism for most
physiological processes across systems. Although the majority of cell signaling principles …
physiological processes across systems. Although the majority of cell signaling principles …
Inferring causal molecular networks: empirical assessment through a community-based effort
It remains unclear whether causal, rather than merely correlational, relationships in
molecular networks can be inferred in complex biological settings. Here we describe the …
molecular networks can be inferred in complex biological settings. Here we describe the …
The recurrent architecture of tumour initiation, progression and drug sensitivity
A Califano, MJ Alvarez - Nature Reviews Cancer, 2017 - nature.com
Recent studies across multiple tumour types are starting to reveal a recurrent regulatory
architecture in which genomic alterations cluster upstream of functional master regulator …
architecture in which genomic alterations cluster upstream of functional master regulator …
Cell fate reprogramming by control of intracellular network dynamics
JGT Zanudo, R Albert - PLoS computational biology, 2015 - journals.plos.org
Identifying control strategies for biological networks is paramount for practical applications
that involve reprogramming a cell's fate, such as disease therapeutics and stem cell …
that involve reprogramming a cell's fate, such as disease therapeutics and stem cell …
CellNOptR: a flexible toolkit to train protein signaling networks to data using multiple logic formalisms
Background Cells process signals using complex and dynamic networks. Studying how this
is performed in a context and cell type specific way is essential to understand signaling both …
is performed in a context and cell type specific way is essential to understand signaling both …
Cancer systems biology: a peek into the future of patient care?
HMJ Werner, GB Mills, PT Ram - Nature reviews Clinical oncology, 2014 - nature.com
Traditionally, scientific research has focused on studying individual events, such as single
mutations, gene function, or the effect that mutating one protein has on a biological …
mutations, gene function, or the effect that mutating one protein has on a biological …
Crosstalk and signaling switches in mitogen-activated protein kinase cascades
Mitogen-activated protein kinase (MAPK) cascades control cell fate decisions, such as
proliferation, differentiation, and apoptosis by integrating and processing intra-and …
proliferation, differentiation, and apoptosis by integrating and processing intra-and …