Iron and cancer: more ore to be mined

SV Torti, FM Torti - Nature Reviews Cancer, 2013 - nature.com
Iron is an essential nutrient that facilitates cell proliferation and growth. However, iron also
has the capacity to engage in redox cycling and free radical formation. Therefore, iron can …

TETonic shift: biological roles of TET proteins in DNA demethylation and transcription

WA Pastor, L Aravind, A Rao - Nature reviews Molecular cell biology, 2013 - nature.com
In many organisms, the methylation of cytosine in DNA has a key role in silencing'parasitic'
DNA elements, regulating transcription and establishing cellular identity. The recent …

5-Hydroxymethylcytosine signatures in cell-free DNA provide information about tumor types and stages

CX Song, S Yin, L Ma, A Wheeler, Y Chen, Y Zhang… - Cell research, 2017 - nature.com
Hydroxymethylcytosine (5hmC) is an important mammalian DNA epigenetic modification
that has been linked to gene regulation and cancer pathogenesis. Here we explored the …

[HTML][HTML] Development and application of the adverse outcome pathway framework for understanding and predicting chronic toxicity: II. A focus on growth impairment in …

KJ Groh, RN Carvalho, JK Chipman, ND Denslow… - Chemosphere, 2015 - Elsevier
Adverse outcome pathways (AOPs) organize knowledge on the progression of toxicity
through levels of biological organization. By determining the linkages between toxicity …

Rapid reprogramming of epigenetic and transcriptional profiles in mammalian culture systems

CE Nestor, R Ottaviano, D Reinhardt, HA Cruickshanks… - Genome biology, 2015 - Springer
Background The DNA methylation profiles of mammalian cell lines differ from those of the
primary tissues from which they were derived, exhibiting increasing divergence from the in …

Liquid biopsies beyond mutation calling: genomic and epigenomic features of cell-free DNA in cancer

AK Angeles, F Janke, S Bauer, P Christopoulos… - Cancers, 2021 - mdpi.com
Simple Summary Liquid biopsies provide a non-invasive means to diagnose and profile
tumors when tissue is not available. Sequence-based analysis of cell-free DNA (cfDNA) is …

The role of 5-hydroxymethylcytosine in human cancer

GP Pfeifer, W Xiong, MA Hahn, SG Jin - Cell and tissue research, 2014 - Springer
The patterns of DNA methylation in human cancer cells are highly abnormal and often
involve the acquisition of DNA hypermethylation at hundreds or thousands of CpG islands …

Defending the genome from the enemy within: mechanisms of retrotransposon suppression in the mouse germline

JH Crichton, DS Dunican, M MacLennan… - Cellular and molecular …, 2014 - Springer
The viability of any species requires that the genome is kept stable as it is transmitted from
generation to generation by the germ cells. One of the challenges to transgenerational …

5-Hydroxymethylome in circulating cell-free DNA as a potential biomarker for non-small-cell lung cancer

J Zhang, X Han, C Gao, Y Xing, Z Qi… - Genomics …, 2018 - academic.oup.com
Non-small-cell lung cancer (NSCLC), the most common type of lung cancer accounting for
85% of the cases, is often diagnosed at advanced stages owing to the lack of efficient early …

Loss of Tet1-associated 5-hydroxymethylcytosine is concomitant with aberrant promoter hypermethylation in liver cancer

JP Thomson, R Ottaviano, EB Unterberger… - Cancer research, 2016 - AACR
Aberrant hypermethylation of CpG islands (CGI) in human tumors occurs predominantly at
repressed genes in the host tissue, but the preceding events driving this phenomenon are …