Structure‐based design of inhibitors of protein–protein interactions: mimicking peptide binding epitopes

M Pelay‐Gimeno, A Glas, O Koch… - Angewandte Chemie …, 2015 - Wiley Online Library
Protein–protein interactions (PPIs) are involved at all levels of cellular organization, thus
making the development of PPI inhibitors extremely valuable. The identification of selective …

Design of folded peptides

J Venkatraman, SC Shankaramma… - Chemical reviews, 2001 - ACS Publications
The construction of complex protein folds relies on the precise conversion of a linear
polypeptide chain into a compact 3-dimensional structure. The interplay of forces that link …

[PDF][PDF] Foldamers: a manifesto

SH Gellman - Accounts of chemical research, 1998 - gellman.chem.wisc.edu
Nature relies on large molecules to carry out sophisticated chemical operations, such as
catalysis, tight and specific binding, directed flow of electrons, or controlled crystallization of …

Peptides containing β-amino acid patterns: challenges and successes in medicinal chemistry

C Cabrele, TA Martinek, O Reiser… - Journal of Medicinal …, 2014 - ACS Publications
The construction of bioactive peptides using β-amino acid-containing sequence patterns is a
very promising strategy to obtain analogues that exhibit properties of high interest for …

Mechanism of helix induction by trifluoroethanol: a framework for extrapolating the helix-forming properties of peptides from trifluoroethanol/water mixtures back to …

P Luo, RL Baldwin - Biochemistry, 1997 - ACS Publications
To establish a framework for extrapolating the helix-forming properties of peptides from
TFE/H2O mixtures (TFE= 2, 2, 2-trifluoroethanol) back to water, the thermal unfolding curves …

Folding dynamics and mechanism of β-hairpin formation

V Munoz, PA Thompson, J Hofrichter, WA Eaton - Nature, 1997 - nature.com
Protein chains coil into α-helices and β-sheet structures. Knowing the timescales and
mechanism of formation of these basic structural elements is essential for understanding …

Elucidating the folding problem of α-helices: local motifs, long-range electrostatics, ionic-strength dependence and prediction of NMR parameters

E Lacroix, AR Viguera, L Serrano - Journal of molecular biology, 1998 - Elsevier
The information about the conformational behavior of monomeric helical peptides in
solution, as well as the α-helix stability in proteins, has been previously utilized to derive a …

De novo design and structural characterization of proteins and metalloproteins

WF DeGrado, CM Summa, V Pavone… - Annual review of …, 1999 - annualreviews.org
▪ Abstract De novo protein design has recently emerged as an attractive approach for
studying the structure and function of proteins. This approach critically tests our …

Structural chemistry of peptides containing backbone expanded amino acid residues: conformational features of β, γ, and hybrid peptides

PG Vasudev, S Chatterjee, N Shamala… - Chemical …, 2011 - ACS Publications
The remarkable complexity of globular protein structures was first revealed about half a
century ago, when the crystal structure of myoglobin was determined at 2.4 Å. 1 In the …

Is protein folding hierarchic? I. Local structure and peptide folding

RL Baldwin, GD Rose - Trends in biochemical sciences, 1999 - cell.com
The folding reactions of some small proteins show clear evidence of a hierarchic process,
whereas others, lacking detectable intermediates, do not. Nevertheless, we argue that both …