Microorganisms from deep-sea hydrothermal vents

X Zeng, K Alain, Z Shao - Marine Life Science & Technology, 2021 - Springer
With a rich variety of chemical energy sources and steep physical and chemical gradients,
hydrothermal vent systems offer a range of habitats to support microbial life. Cultivation …

Microbial community profiling of ammonia and nitrite oxidizing bacterial enrichments from brackishwater ecosystems for mitigating nitrogen species

V Baskaran, PK Patil, ML Antony, S Avunje… - Scientific Reports, 2020 - nature.com
Nitrogen species such as ammonia and nitrite are considered as major stressors in modern
aquaculture practices. We developed enrichments of ammonia oxidising bacteria (AOB) and …

Microbe-driven elemental cycling enables microbial adaptation to deep-sea ferromanganese nodule sediment fields

D Zhang, X Li, Y Wu, X Xu, Y Liu, B Shi, Y Peng, D Dai… - Microbiome, 2023 - Springer
Background Ferromanganese nodule-bearing deep-sea sediments cover vast areas of the
ocean floor, representing a distinctive habitat in the abyss. These sediments harbor unique …

Microdiversity characterizes prevalent phylogenetic clades in the glacier-fed stream microbiome

S Fodelianakis, AD Washburne, M Bourquin… - The ISME …, 2022 - academic.oup.com
Glacier-fed streams (GFSs) are extreme and rapidly vanishing ecosystems, and yet they
harbor diverse microbial communities. Although our understanding of the GFS microbiome …

Metagenomic analysis of composition, function and cycling processes of microbial community in water, sediment and effluent of Litopenaeus vannamei farming …

M Zhang, L Pan, F Huang, S Gao, C Su, M Zhang, Z He - Aquaculture, 2019 - Elsevier
With the increasing production of farmed Litopenaeus vannamei, the discharge of culture
sewage and the accumulation of deleterious substances (nitrite, ammonia, sulfide…) in …

Metagenomic insight into patterns and mechanism of nitrogen cycle during biocrust succession

Q Wang, Y Han, S Lan, C Hu - Frontiers in Microbiology, 2021 - frontiersin.org
The successional ecology of nitrogen cycling in biocrusts and the linkages to ecosystem
processes remains unclear. To explore this, four successional stages of natural biocrust with …

Comparative metagenomics reveals the microbial diversity and metabolic potentials in the sediments and surrounding seawaters of Qinhuangdao mariculture area

S Wang, Z Yan, P Wang, X Zheng, J Fan - PloS one, 2020 - journals.plos.org
Qinhuangdao coastal area is an important mariculture area in North China. Microbial
communities play an important role in driving biogeochemical cycle and energy flow. It is …

[HTML][HTML] Deep-sea sediment metagenome from Bay of Bengal reveals distinct microbial diversity and functional significance

J Marimuthu, VR Rangamaran, SHS Subramanian… - Genomics, 2022 - Elsevier
Abstract Bay of Bengal (BoB) has immense significance with respect to ecological diversity
and natural resources. Studies on microbial profiling and their functional significance at …

[HTML][HTML] Extremophile deep-sea viral communities from hydrothermal vents: Structural and functional analysis

HG Castelán-Sánchez, I Lopéz-Rosas… - Marine genomics, 2019 - Elsevier
Ten publicly available metagenomic data sets from hydrothermal vents were analyzed to
determine the taxonomic structure of the viral communities present, as well as their potential …

Genome-resolved evidence for functionally redundant communities and novel nitrogen fixers in the deyin-1 hydrothermal field, Mid-Atlantic Ridge

J Pan, W Xu, Z Zhou, Z Shao, C Dong, L Liu, Z Luo… - Microbiome, 2022 - Springer
Background Deep-sea hydrothermal vents represent unique ecosystems that redefine our
understanding of the limits of life. They are widely distributed in deep oceans and typically …