The promise and challenge of high-throughput sequencing of the antibody repertoire
G Georgiou, GC Ippolito, J Beausang, CE Busse… - Nature …, 2014 - nature.com
Efforts to determine the antibody repertoire encoded by B cells in the blood or lymphoid
organs using high-throughput DNA sequencing technologies have been advancing at an …
organs using high-throughput DNA sequencing technologies have been advancing at an …
Practical guidelines for B-cell receptor repertoire sequencing analysis
G Yaari, SH Kleinstein - Genome medicine, 2015 - Springer
High-throughput sequencing of B-cell immunoglobulin repertoires is increasingly being
applied to gain insights into the adaptive immune response in healthy individuals and in …
applied to gain insights into the adaptive immune response in healthy individuals and in …
Functional antibodies exhibit light chain coherence
DB Jaffe, P Shahi, BA Adams, AM Chrisman… - Nature, 2022 - nature.com
The vertebrate adaptive immune system modifies the genome of individual B cells to encode
antibodies that bind particular antigens. In most mammals, antibodies are composed of …
antibodies that bind particular antigens. In most mammals, antibodies are composed of …
Production of individualized V gene databases reveals high levels of immunoglobulin genetic diversity
MM Corcoran, GE Phad, NV Bernat… - Nature …, 2016 - nature.com
Comprehensive knowledge of immunoglobulin genetics is required to advance our
understanding of B cell biology. Validated immunoglobulin variable (V) gene databases are …
understanding of B cell biology. Validated immunoglobulin variable (V) gene databases are …
Statistical inference of the generation probability of T-cell receptors from sequence repertoires
A Murugan, T Mora, AM Walczak… - Proceedings of the …, 2012 - National Acad Sciences
Stochastic rearrangement of germline V-, D-, and J-genes to create variable coding
sequence for certain cell surface receptors is at the origin of immune system diversity. This …
sequence for certain cell surface receptors is at the origin of immune system diversity. This …
Automated analysis of high-throughput B-cell sequencing data reveals a high frequency of novel immunoglobulin V gene segment alleles
Individual variation in germline and expressed B-cell immunoglobulin (Ig) repertoires has
been associated with aging, disease susceptibility, and differential response to infection and …
been associated with aging, disease susceptibility, and differential response to infection and …
IGHV allele similarity clustering improves genotype inference from adaptive immune receptor repertoire sequencing data
In adaptive immune receptor repertoire analysis, determining the germline variable (V) allele
associated with each T-and B-cell receptor sequence is a crucial step. This process is highly …
associated with each T-and B-cell receptor sequence is a crucial step. This process is highly …
The immunoglobulin heavy chain locus: genetic variation, missing data, and implications for human disease
The immunoglobulin (IG) loci consist of repeated and highly homologous sets of genes of
different types, variable (V), diversity (D) and junction (J), that rearrange in developing B …
different types, variable (V), diversity (D) and junction (J), that rearrange in developing B …
Association between a common immunoglobulin heavy chain allele and rheumatic heart disease risk in Oceania
T Parks, MM Mirabel, J Kado, K Auckland… - Nature …, 2017 - nature.com
The indigenous populations of the South Pacific experience a high burden of rheumatic
heart disease (RHD). Here we report a genome-wide association study (GWAS) of RHD …
heart disease (RHD). Here we report a genome-wide association study (GWAS) of RHD …
The individual and population genetics of antibody immunity
Antibodies (Abs) produced by immunoglobulin (IG) genes are the most diverse proteins
expressed in humans. While part of this diversity is generated by recombination during B …
expressed in humans. While part of this diversity is generated by recombination during B …