Cellular processes are typically carried out by protein complexes and functional modules.
Identifying them plays an important role for our attempt to reveal principles of cellular …

The increasing availability of large-scale protein-protein interaction data has made it
possible to understand the basic components and organization of cell machinery from the …

Background Glioblastoma multiforme (GBM) is the most common and aggressive type of
brain tumor in humans and the first cancer with comprehensive genomic profiles mapped by …

In recent years, researchers have tried to inject dynamic information into static protein
interaction networks (PIN s). The paper first proposes a three‐sigma method to identify …

Background Identification of protein complexes and functional modules from protein-protein
interaction (PPI) networks is crucial to understanding the principles of cellular organization …

The increasing availability and significance of large-scale protein-protein interaction (ppi)
data has resulted in a flurry of research activity to comprehend the organization, processes …

With more dynamic information available, researchers' attention has recently shifted from
static properties to dynamic properties of protein–protein interaction networks. To …

Many complex networks such as computer and social networks exhibit modular structures,
where links between nodes are much denser within modules than between modules. It is …

The ability to identify and characterize not only the protein-protein interactions but also their
internal modular organization through network analysis is fundamental for understanding …

We consider the problem of aligning two metabolic pathways. Unlike traditional approaches,
we do not restrict the alignment to one-to-one mappings between the molecules (nodes) of …