Transcriptomic characterization of two major Fusarium resistance quantitative trait loci (QTLs), Fhb1 and Qfhs.ifa‐5A, identifies novel candidate genes

W Schweiger, B Steiner, C Ametz… - Molecular plant …, 2013 - Wiley Online Library
Fusarium head blight, caused by F usarium graminearum, is a devastating disease of wheat.
We developed near‐isogenic lines (NILs) differing in the two strongest known F …

Complementary genetic and genomic approaches help characterize the linkage group I seed protein QTL in soybean

YT Bolon, B Joseph, SB Cannon, MA Graham… - BMC Plant …, 2010 - Springer
Background The nutritional and economic value of many crops is effectively a function of
seed protein and oil content. Insight into the genetic and molecular control mechanisms …

Brain transcriptome variation among behaviorally distinct strains of zebrafish (Danio rerio)

RE Drew, ML Settles, EJ Churchill, SM Williams, S Balli… - BMC genomics, 2012 - Springer
Background Domesticated animal populations often show profound reductions in predator
avoidance and fear-related behavior compared to wild populations. These reductions are …

Patterns of divergence of a large family of nodule cysteine‐rich peptides in accessions of Medicago truncatula

S Nallu, KAT Silverstein, P Zhou, ND Young… - The Plant …, 2014 - Wiley Online Library
The nodule cysteine‐rich (NCR) groups of defensin‐like (DEFL) genes are one of the largest
gene families expressed in the nodules of some legume plants. They have only been …

An integrative approach to genomic introgression mapping

AJ Severin, GA Peiffer, WW Xu, DL Hyten… - Plant …, 2010 - academic.oup.com
Near-isogenic lines (NILs) are valuable genetic resources for many crop species, including
soybean (Glycine max). The development of new molecular platforms promises to …

Transcriptome analysis of a barley breeding program examines gene expression diversity and reveals target genes for malting quality improvement

M Muñoz-Amatriaín, Y Xiong, MR Schmitt, H Bilgic… - BMC genomics, 2010 - Springer
Background Advanced cycle breeding utilizes crosses among elite lines and is a successful
method to develop new inbreds. However, it results in a reduction in genetic diversity within …

The barley UNICULM2 gene resides in a centromeric region and may be associated with signaling and stress responses

RJ Okagaki, S Cho, WM Kruger, WW Xu… - Functional & integrative …, 2013 - Springer
Vegetative axillary meristem (AXM) activity results in the production of branches. In barley
(Hordeum vulgare L.), vegetative AXM develop in the crown and give rise to modified …

Quantitative trait loci conferring resistance to Fusarium head blight in barley respond differentially to Fusarium graminearum infection

H Jia, BP Millett, S Cho, H Bilgic, WW Xu… - Functional & integrative …, 2011 - Springer
Fusarium head blight (FHB), primarily caused by Fusarium graminearum, reduces grain
yield and quality in barley. Resistance to FHB is partial and quantitatively inherited …

Single‐feature polymorphism discovery in the transcriptome of tetraploid alfalfa

SS Yang, WW Xu, M Tesfaye, JAFS Lamb… - The Plant …, 2009 - Wiley Online Library
Advances in alfalfa [Medicago sativa (L.) subsp. sativa] breeding, molecular genetics, and
genomics have been slow because this crop is an allogamous autotetraploid (2n= 4x= 32) …

Genes and QTLs Controlling Inflorescence and Stem Branch Architecture in Leymus (Poaceae: Triticeae) Wildrye

SR Larson, EA Kellogg, KB Jensen - Journal of Heredity, 2013 - academic.oup.com
Grass inflorescence and stem branches show recognizable architectural differences among
species. The inflorescence branches of Triticeae cereals and grasses, including wheat …