[HTML][HTML] Global entrainment of transcriptional systems to periodic inputs

G Russo, M Di Bernardo, ED Sontag - PLoS computational …, 2010 - journals.plos.org
This paper addresses the problem of providing mathematical conditions that allow one to
ensure that biological networks, such as transcriptional systems, can be globally entrained …

[HTML][HTML] Noise-induced switches in network systems of the genetic toggle switch

J Wang, J Zhang, Z Yuan, T Zhou - BMC systems biology, 2007 - Springer
Background Bistability, the capacity to achieve two distinct stable steady states in response
to a set of external stimuli, arises within biological systems ranging from the λ phage switch …

Synchronization of genetic oscillators

T Zhou, J Zhang, Z Yuan, L Chen - Chaos: An Interdisciplinary Journal …, 2008 - pubs.aip.org
Synchronization of genetic or cellular oscillators is a central topic in understanding the
rhythmicity of living organisms at both molecular and cellular levels. Here, we show how a …

Multisynchronization of coupled heterogeneous genetic oscillator networks via partial impulsive control

DX He, G Ling, ZH Guan, B Hu… - IEEE Transactions on …, 2016 - ieeexplore.ieee.org
This paper focuses on the collective dynamics of multisynchronization among
heterogeneous genetic oscillators under a partial impulsive control strategy. The coupled …

How to synchronize biological clocks

G Russo, MD Bernardo - Journal of Computational Biology, 2009 - liebertpub.com
This paper is concerned with a novel algorithm to study networks of biological clocks. A new
set of conditions is established that can be used to verify whether an existing network …

[PDF][PDF] 基因调控网络的控制: 机遇与挑战

王沛, 吕金虎 - 自动化学报, 2013 - aas.net.cn
摘要众所周知, 基因调控网络(Genetic regulatory networks, GRNs) 是一类基本且重要的生物
网络. 基因调控网络可以通过输入, 噪声, 参数以及正负反馈等进行功能的鲁棒性调节与控制 …

Synchronization and clustering of synthetic genetic networks: a role for cis-regulatory modules

J Zhang, Z Yuan, T Zhou - Physical Review E—Statistical, Nonlinear, and Soft …, 2009 - APS
The effect of signal integration through cis-regulatory modules (CRMs) on synchronization
and clustering of populations of two-component genetic oscillators coupled with quorum …

[HTML][HTML] Integrated information as a measure of cognitive processes in coupled genetic repressilators

L Abrego, A Zaikin - Entropy, 2019 - mdpi.com
Intercellular communication and its coordination allow cells to exhibit multistability as a form
of adaptation. This conveys information processing from intracellular signaling networks …

Colored noise induced bistable switch in the genetic toggle switch systems

P Wang, J Lü, X Yu - IEEE/ACM Transactions on computational …, 2014 - ieeexplore.ieee.org
Noise can induce various dynamical behaviors in nonlinear systems. White noise perturbed
systems have been extensively investigated during the last decades. In gene networks …

Coherence, collective rhythm, and phase difference distribution in populations of stochastic genetic oscillators with cellular communication

Z Yuan, J Zhang, T Zhou - Physical Review E—Statistical, Nonlinear, and Soft …, 2008 - APS
An ensemble of stochastic genetic relaxation oscillators via phase-attractive or repulsive cell-
to-cell communication are investigated. In the phase-attractive coupling case, it is found that …