Chromatin-associated RNAs as facilitators of functional genomic interactions

X Li, XD Fu - Nature Reviews Genetics, 2019 - nature.com
Mammalian genomes are extensively transcribed, which produces a large number of both
coding and non-coding transcripts. Various RNAs are physically associated with chromatin …

The new (dis) order in RNA regulation

AI Järvelin, M Noerenberg, I Davis… - Cell Communication and …, 2016 - Springer
RNA-binding proteins play a key role in the regulation of all aspects of RNA metabolism,
from the synthesis of RNA to its decay. Protein-RNA interactions have been thought to be …

Poly (ADP-ribosylation) of P-TEFb by PARP1 disrupts phase separation to inhibit global transcription after DNA damage

H Fu, R Liu, Z Jia, R Li, F Zhu, W Zhu, Y Shao, Y Jin… - Nature cell …, 2022 - nature.com
DNA damage shuts down genome-wide transcription to prevent transcriptional mutagenesis
and to initiate repair signalling, but the mechanism to stall elongating RNA polymerase II …

[HTML][HTML] SR proteins collaborate with 7SK and promoter-associated nascent RNA to release paused polymerase

X Ji, Y Zhou, S Pandit, J Huang, H Li, CY Lin, R Xiao… - Cell, 2013 - cell.com
RNAP II is frequently paused near gene promoters in mammals, and its transition to
productive elongation requires active recruitment of P-TEFb, a cyclin-dependent kinase for …

The mTOR complex controls HIV latency

E Besnard, S Hakre, M Kampmann, HW Lim… - Cell host & …, 2016 - cell.com
Summary A population of CD4 T lymphocytes harboring latent HIV genomes can persist in
patients on antiretroviral therapy, posing a barrier to HIV eradication. To examine cellular …

The BET bromodomain inhibitor JQ1 activates HIV latency through antagonizing Brd4 inhibition of Tat-transactivation

Z Li, J Guo, Y Wu, Q Zhou - Nucleic acids research, 2013 - academic.oup.com
Latent HIV reservoirs are the primary hurdle to eradication of infection. Identification of
agents, pathways and molecular mechanisms that activate latent provirus may, in the …

BET bromodomain inhibition as a novel strategy for reactivation of HIV-1

C Banerjee, N Archin, D Michaels… - Journal of leukocyte …, 2012 - academic.oup.com
BET bromodomain antagonist JQ1 reactivates HIV-1, while suppressing T cell activation
genes, and upregulating histone modification genes that favor increased Tat activity. The …

The Tat inhibitor didehydro-cortistatin A prevents HIV-1 reactivation from latency

G Mousseau, CF Kessing, R Fromentin, L Trautmann… - MBio, 2015 - Am Soc Microbiol
Antiretroviral therapy (ART) inhibits HIV-1 replication, but the virus persists in latently
infected resting memory CD4+ T cells susceptible to viral reactivation. The virus-encoded …

Brd4 activates P-TEFb for RNA polymerase II CTD phosphorylation

F Itzen, AK Greifenberg, CA Bösken… - Nucleic acids …, 2014 - academic.oup.com
The bromodomain protein Brd4 regulates the transcription of signal-inducible genes. This is
achieved by recruiting the positive transcription elongation factor P-TEFb to promoters by its …

HIV-1 transcription and latency: an update

C Van Lint, S Bouchat, A Marcello - Retrovirology, 2013 - Springer
Combination antiretroviral therapy, despite being potent and life-prolonging, is not curative
and does not eradicate HIV-1 infection since interruption of treatment inevitably results in a …