A comprehensive survey on deep graph representation learning
Graph representation learning aims to effectively encode high-dimensional sparse graph-
structured data into low-dimensional dense vectors, which is a fundamental task that has …
structured data into low-dimensional dense vectors, which is a fundamental task that has …
Diffusion models in de novo drug design
Diffusion models have emerged as powerful tools for molecular generation, particularly in
the context of 3D molecular structures. Inspired by nonequilibrium statistical physics, these …
the context of 3D molecular structures. Inspired by nonequilibrium statistical physics, these …
Generative diffusion models on graphs: Methods and applications
Diffusion models, as a novel generative paradigm, have achieved remarkable success in
various image generation tasks such as image inpainting, image-to-text translation, and …
various image generation tasks such as image inpainting, image-to-text translation, and …
Graphvf: Controllable protein-specific 3d molecule generation with variational flow
Designing molecules that bind to specific target proteins is a fundamental task in drug
discovery. Recent models leverage geometric constraints to generate ligand molecules that …
discovery. Recent models leverage geometric constraints to generate ligand molecules that …
Equivariant 3D-Conditional Diffusion Model for De Novo Drug Design
De novo drug design speeds up drug discovery, mitigating its time and cost burdens with
advanced computational methods. Previous work either insufficiently utilized the 3D …
advanced computational methods. Previous work either insufficiently utilized the 3D …