[HTML][HTML] How computational models can help unlock biological systems

GW Brodland - Seminars in cell & developmental biology, 2015 - Elsevier
With computation models playing an ever increasing role in the advancement of science, it is
important that researchers understand what it means to model something; recognize the …

Hexagonal patterning of the Drosophila eye

RI Johnson - Developmental biology, 2021 - Elsevier
A complex network of transcription factor interactions propagates across the larval eye disc
to establish columns of evenly-spaced R8 precursor cells, the founding cells of Drosophila …

A dynamic cell adhesion surface regulates tissue architecture in growth plate cartilage

SM Romereim, NH Conoan, B Chen… - …, 2014 - journals.biologists.com
The architecture and morphogenetic properties of tissues are founded in the tissue-specific
regulation of cell behaviors. In endochondral bones, the growth plate cartilage promotes …

Cell adhesion in Drosophila: versatility of cadherin and integrin complexes during development

NA Bulgakova, B Klapholz, NH Brown - Current opinion in cell biology, 2012 - Elsevier
We highlight recent progress in understanding cadherin and integrin function in the model
organism Drosophila. New functions for these adhesion receptors continue to be discovered …

The E-cadherin/AmotL2 complex organizes actin filaments required for epithelial hexagonal packing and blastocyst hatching

S Hildebrand, S Hultin, A Subramani, S Petropoulos… - Scientific reports, 2017 - nature.com
Epithelial cells connect via cell-cell junctions to form sheets of cells with separate cellular
compartments. These cellular connections are essential for the generation of cellular forms …

Hexagonal patterning of the insect compound eye: Facet area variation, defects, and disorder

S Kim, JJ Cassidy, B Yang, RW Carthew… - Biophysical journal, 2016 - cell.com
The regular hexagonal array morphology of facets (ommatidia) in the Drosophila compound
eye is accomplished by regulation of cell differentiation and planar cell polarity during …

Computational analysis of three-dimensional epithelial morphogenesis using vertex models

XX Du, M Osterfield, SY Shvartsman - Physical biology, 2014 - iopscience.iop.org
The folding of epithelial sheets, accompanied by cell shape changes and rearrangements,
gives rise to three-dimensional structures during development. Recently, some aspects of …

Cell shapes and patterns as quantitative indicators of tissue stress in the plant epidermis

S Kim, S Hilgenfeldt - Soft matter, 2015 - pubs.rsc.org
In a confluent, single-cell tissue layer, we show that cell shapes and statistics correlate
directly with the tissue's mechanical properties, described by an energy functional with …

Dynamics and functions of E-cadherin complexes in epithelial cell and tissue morphogenesis

N Zhang, M Häring, F Wolf, J Großhans… - Marine Life Science & …, 2023 - Springer
Cell–cell adhesion is at the center of structure and dynamics of epithelial tissue. E-cadherin–
catenin complexes mediate Ca2+-dependent trans-homodimerization and constitute the …

Quantitative modelling of epithelial morphogenesis: integrating cell mechanics and molecular dynamics

CY Jessica, R Fernandez-Gonzalez - Seminars in cell & developmental …, 2017 - Elsevier
Epithelial tissues form and repair in complex processes influenced by molecular and
physical factors. Recent years have witnessed the development of new microscopy …