The miR-15/107 group of microRNA genes: evolutionary biology, cellular functions, and roles in human diseases

JR Finnerty, WX Wang, SS Hébert, BR Wilfred… - Journal of molecular …, 2010 - Elsevier
The miR-15/107 group of microRNA (miRNA) gene is increasingly appreciated to serve key
functions in humans. These miRNAs regulate gene expression involved in cell division …

Evolution and phylogeny of microRNAs—protocols, pitfalls, and problems

CA Velandia-Huerto, AM Yazbeck, J Schor… - … : MicroRNA Biology and …, 2022 - Springer
MicroRNAs are important regulators in many eukaryotic lineages. Typical miRNAs have a
length of about 22nt and are processed from precursors that form a characteristic hairpin …

Identification and characterization of novel amphioxus microRNAs by Solexa sequencing

X Chen, Q Li, J Wang, X Guo, X Jiang, Z Ren, C Weng… - Genome biology, 2009 - Springer
Background microRNAs (miRNAs) are endogenous small non-coding RNAs that regulate
gene expression at the post-transcriptional level. While the number of known human and …

A critical appraisal of the use of microRNA data in phylogenetics

RC Thomson, DC Plachetzki… - Proceedings of the …, 2014 - National Acad Sciences
Recent progress in resolving the tree of life continues to expose relationships that resist
resolution, which drives the search for novel sources of information to solve these difficult …

The Transcriptome of an Amphioxus, Asymmetron lucayanum, from the Bahamas: A Window into Chordate Evolution

JX Yue, JK Yu, NH Putnam… - Genome biology and …, 2014 - academic.oup.com
Cephalochordates, the sister group of tunicates plus vertebrates, have been called “living
fossils” due to their resemblance to fossil chordates from Cambrian strata. The genome of …

[HTML][HTML] The expansion of animal microRNA families revisited

J Hertel, PF Stadler - Life, 2015 - mdpi.com
MicroRNAs are important regulatory small RNAs in many eukaryotes. Due to their small size
and simple structure, they are readily innovated de novo. Throughout the evolution of …

[PDF][PDF] Large-scale annotation and evolution analysis of MiRNA in insects

X Ma, K He, Z Shi, M Li, F Li… - Genome biology and …, 2021 - academic.oup.com
Insects are among the most diverse and successful groups of animals and exhibit great
morphological diversity and complexity. The innovation of wings and metamorphosis are …

Rapid Evolutionary Rates and Unique Genomic Signatures Discovered in the First Reference Genome for the Southern Ocean Salp, Salpa thompsoni (Urochordata …

NK Jue, PG Batta-Lona, S Trusiak… - Genome biology and …, 2016 - academic.oup.com
A preliminary genome sequence has been assembled for the Southern Ocean salp, Salpa
thompsoni (Urochordata, Thaliacea). Despite the ecological importance of this species in …

[HTML][HTML] Novel and conserved micrornas in Dalian purple urchin (Strongylocentrotus nudus) identified by next generation sequencing

Z Wei, X Liu, T Feng, Y Chang - International journal of biological …, 2011 - ncbi.nlm.nih.gov
MicroRNAs are regulators in regulation of broad range of phenotypes. The purple urchin,
Strongylocentrotus nudus, is one of the most important marine economic animals that widely …

MicroRNA-mediated gene regulation plays a minor role in the transcriptomic plasticity of cold-acclimated zebrafish brain tissue

R Yang, Z Dai, S Chen, L Chen - BMC genomics, 2011 - Springer
Background MicroRNAs (miRNAs) play important roles in regulating the expression of
protein-coding genes by directing the degradation and/or repression of the translation of …