Recent understanding of soil acidobacteria and their ecological significance: a critical review

S Kalam, A Basu, I Ahmad, RZ Sayyed… - Frontiers in …, 2020 - frontiersin.org
Acidobacteria represents an underrepresented soil bacterial phylum whose members are
pervasive and copiously distributed across nearly all ecosystems. Acidobacterial sequences …

Small molecules from the human microbiota

MS Donia, MA Fischbach - Science, 2015 - science.org
BACKGROUND Two developments in distinct fields are converging to create interest in
discovering small molecules from the human microbiome. First, the use of genomics to guide …

Genome mining for unknown–unknown natural products

DA Yee, K Niwa, B Perlatti, M Chen, Y Li… - Nature chemical …, 2023 - nature.com
Genome mining of biosynthetic pathways with no identifiable core enzymes can lead to
discovery of the so-called unknown (biosynthetic route)–unknown (molecular structure) …

Insights into secondary metabolism from a global analysis of prokaryotic biosynthetic gene clusters

P Cimermancic, MH Medema, J Claesen, K Kurita… - Cell, 2014 - cell.com
Although biosynthetic gene clusters (BGCs) have been discovered for hundreds of bacterial
metabolites, our knowledge of their diversity remains limited. Here, we used a novel …

Biosynthesis of fluopsin C, a copper-containing antibiotic from Pseudomonas aeruginosa

JB Patteson, AT Putz, L Tao, WC Simke, LH Bryant III… - Science, 2021 - science.org
Metal-binding natural products contribute to metal acquisition and bacterial virulence, but
their roles in metal stress response are underexplored. We show that a five-enzyme pathway …

[PDF][PDF] Plant growth promoting rhizobacteria: a critical review

BS Saharan, V Nehra - Life Sci Med Res, 2011 - researchgate.net
Plant growth-promoting rhizobacteria (PGPR) are naturally occurring soil bacteria that
aggressively colonize plant roots and benefit plants by providing growth promotion …

Methanotrophs and copper

JD Semrau, AA DiSpirito, S Yoon - FEMS microbiology reviews, 2010 - academic.oup.com
Methanotrophs, cells that consume methane (CH4) as their sole source of carbon and
energy, play key roles in the global carbon cycle, including controlling anthropogenic and …

Siderophore-based iron acquisition and pathogen control

M Miethke, MA Marahiel - Microbiology and molecular biology …, 2007 - Am Soc Microbiol
High-affinity iron acquisition is mediated by siderophore-dependent pathways in the majority
of pathogenic and nonpathogenic bacteria and fungi. Considerable progress has been …

Microbial siderophores: a mini review

R Saha, N Saha, RS Donofrio… - Journal of basic …, 2013 - Wiley Online Library
Iron is one of the major limiting factors and essential nutrients of microbial life. Since in
nature it is not readily available in the preferred form, microorganisms produce small high …

Three Genomes from the Phylum Acidobacteria Provide Insight into the Lifestyles of These Microorganisms in Soils

NL Ward, JF Challacombe, PH Janssen… - Applied and …, 2009 - Am Soc Microbiol
The complete genomes of three strains from the phylum Acidobacteria were compared.
Phylogenetic analysis placed them as a unique phylum. They share genomic traits with …