Gene regulation in time and space during X-chromosome inactivation

A Loda, S Collombet, E Heard - Nature Reviews Molecular Cell Biology, 2022 - nature.com
X-chromosome inactivation (XCI) is the epigenetic mechanism that ensures X-linked dosage
compensation between cells of females (XX karyotype) and males (XY). XCI is essential for …

The 3D genome as moderator of chromosomal communication

J Dekker, L Mirny - Cell, 2016 - cell.com
Proper expression of genes requires communication with their regulatory elements that can
be located elsewhere along the chromosome. The physics of chromatin fibers imposes a …

Non-coding RNAs: the new central dogma of cancer biology

PE Saw, X Xu, J Chen, EW Song - Science China Life Sciences, 2021 - Springer
The central dogma of molecular biology states that the functions of RNA revolve around
protein translation. Until the last decade, most researches were geared towards …

CTCF-mediated functional chromatin interactome in pluripotent cells

L Handoko, H Xu, G Li, CY Ngan, E Chew… - Nature …, 2011 - nature.com
Mammalian genomes are viewed as functional organizations that orchestrate spatial and
temporal gene regulation. CTCF, the most characterized insulator-binding protein, has been …

Functional implications of genome topology

G Cavalli, T Misteli - Nature structural & molecular biology, 2013 - nature.com
Although genomes are defined by their sequence, the linear arrangement of nucleotides is
only their most basic feature. A fundamental property of genomes is their topological …

Long-range chromatin interactions

J Dekker, T Misteli - Cold Spring Harbor perspectives in …, 2015 - cshperspectives.cshlp.org
To accommodate genomes in the limited space of the cell nucleus and ensure the correct
execution of gene expression programs, genomes are packaged in complex fashion in the …

X-chromosome inactivation: a crossroads between chromosome architecture and gene regulation

R Galupa, E Heard - Annual review of genetics, 2018 - annualreviews.org
In somatic nuclei of female therian mammals, the two X chromosomes display very different
chromatin states: One X is typically euchromatic and transcriptionally active, and the other is …

Epigenetic mechanisms in mammals

JK Kim, M Samaranayake, S Pradhan - Cellular and molecular life …, 2009 - Springer
DNA and histone methylation are linked and subjected to mitotic inheritance in mammals.
Yet how methylation is propagated and maintained between successive cell divisions is not …

Regulation of X-chromosome inactivation by the X-inactivation centre

S Augui, EP Nora, E Heard - Nature Reviews Genetics, 2011 - nature.com
X-chromosome inactivation (XCI) ensures dosage compensation in mammals and is a
paradigm for allele-specific gene expression on a chromosome-wide scale. Important …

X chromosome dosage compensation: how mammals keep the balance

B Payer, JT Lee - Annual review of genetics, 2008 - annualreviews.org
The development of genetic sex determination and cytologically distinct sex chromosomes
leads to the potential problem of gene dosage imbalances between autosomes and sex …