The genetics of transcription factor DNA binding variation
Most complex trait-associated variants are located in non-coding regulatory regions of the
genome, where they have been shown to disrupt transcription factor (TF)-DNA binding …
genome, where they have been shown to disrupt transcription factor (TF)-DNA binding …
Regulatory SNPs: altered transcription factor binding sites implicated in complex traits and diseases
AO Degtyareva, EV Antontseva… - International journal of …, 2021 - mdpi.com
The vast majority of the genetic variants (mainly SNPs) associated with various human traits
and diseases map to a noncoding part of the genome and are enriched in its regulatory …
and diseases map to a noncoding part of the genome and are enriched in its regulatory …
Understanding user privacy in Internet of Things environments
During the past decade, user privacy has become an important issue in networked
computing environments. For instance, mobile applications and devices are increasingly …
computing environments. For instance, mobile applications and devices are increasingly …
Single nucleotide polymorphism in transcriptional regulatory regions and expression of environmentally responsive genes
X Wang, DJ Tomso, X Liu, DA Bell - Toxicology and applied pharmacology, 2005 - Elsevier
Single nucleotide polymorphisms (SNPs) in the human genome are DNA sequence
variations that can alter an individual's response to environmental exposure. SNPs in gene …
variations that can alter an individual's response to environmental exposure. SNPs in gene …
is-rSNP: a novel technique for in silico regulatory SNP detection
Motivation: Determining the functional impact of non-coding disease-associated single
nucleotide polymorphisms (SNPs) identified by genome-wide association studies (GWAS) is …
nucleotide polymorphisms (SNPs) identified by genome-wide association studies (GWAS) is …
ORegAnno: an open access database and curation system for literature-derived promoters, transcription factor binding sites and regulatory variation
SB Montgomery, OL Griffith, MC Sleumer… - …, 2006 - academic.oup.com
Motivation: Our understanding of gene regulation is currently limited by our ability to
collectively synthesize and catalogue transcriptional regulatory elements stored in scientific …
collectively synthesize and catalogue transcriptional regulatory elements stored in scientific …
Disease-associated variants in different categories of disease located in distinct regulatory elements
Background The invention of high throughput sequencing technologies has led to the
discoveries of hundreds of thousands of genetic variants associated with thousands of …
discoveries of hundreds of thousands of genetic variants associated with thousands of …
Thermodynamic database for protein–nucleic acid interactions (ProNIT)
Motivation: Protein–nucleic acid interactions are fundamental to the regulation of gene
expression. In order to elucidate the molecular mechanism of protein–nucleic acid …
expression. In order to elucidate the molecular mechanism of protein–nucleic acid …
rSNP_Guide: An integrated database‐tools system for studying SNPs and site‐directed mutations in transcription factor binding sites
JV Ponomarenko, GV Orlova, TI Merkulova… - Human …, 2002 - Wiley Online Library
Since the human genome was sequenced in draft, single nucleotide polymorphism (SNP)
analysis has become one of the keynote fields of bioinformatics. We have developed an …
analysis has become one of the keynote fields of bioinformatics. We have developed an …
Candidate SNP markers of familial and sporadic Alzheimer's diseases are predicted by a significant change in the affinity of TATA-binding protein for human gene …
P Ponomarenko, I Chadaeva, DA Rasskazov… - Frontiers in Aging …, 2017 - frontiersin.org
While year after year, conditions, quality, and duration of human lives have been improving
due to the progress in science, technology, education, and medicine, only eight diseases …
due to the progress in science, technology, education, and medicine, only eight diseases …