The human gut phage community and its implications for health and disease

P Manrique, M Dills, MJ Young - Viruses, 2017 - mdpi.com
In this review, we assess our current understanding of the role of bacteriophages infecting
the human gut bacterial community in health and disease. In general, bacteriophages …

The microbiome: Composition and locations

MS Kennedy, EB Chang - Progress in molecular biology and translational …, 2020 - Elsevier
The human body is home to a diverse and functionally important assemblage of symbiotic
microbes that varies predictably over different spatial scales, both within and across body …

Bacterial metal resistance genes and metal bioavailability in contaminated sediments

S Roosa, R Wattiez, E Prygiel, L Lesven, G Billon… - Environmental …, 2014 - Elsevier
In bacteria a metal may be defined as bioavailable if it crosses the cytoplasmic membrane to
reach the cytoplasm. Once inside the cell, specific metal resistance systems may be …

Changes in microbial functional genes within the soil metagenome during forest ecosystem restoration

S Sun, BD Badgley - Soil Biology and Biochemistry, 2019 - Elsevier
As important mediators of numerous ecological processes, soil microorganisms play
essential roles in the recovery of ecosystems after disturbance. Using next-generation …

The long‐term adaptation of bacterial communities in metal‐contaminated sediments: a metaproteogenomic study

DC Gillan, S Roosa, B Kunath, G Billon… - Environmental …, 2015 - Wiley Online Library
The aim of the study was to understand the effect of a long‐term metal exposure (110 years)
on sediment microbial communities. Two freshwater sites, F érin and M etal E urop, differing …

Metagenomic diagnostics for the simultaneous detection of multiple pathogens in human stool specimens from Cote d'Ivoire: a proof-of-concept study

PHH Schneeberger, SL Becker, JF Pothier… - Infection, Genetics and …, 2016 - Elsevier
Background The intestinal microbiome is a complex community and its role in influencing
human health is poorly understood. While conventional microbiology commonly attributes …

Temperate phages as self-replicating weapons in bacterial competition

XY Li, T Lachnit, S Fraune… - Journal of The …, 2017 - royalsocietypublishing.org
Microbial communities are accompanied by a diverse array of viruses. Through infections of
abundant microbes, these viruses have the potential to mediate competition within the …

Alterations in the diversity and composition of mice gut microbiota by lytic or temperate gut phage treatment

H Bao, M Pang, A Olaniran, X Zhang, H Zhang… - Applied microbiology …, 2018 - Springer
Phages, the most abundant species in the mammalian gut, have numerous advantages as
biocontrol agent over antibiotics. In this study, mice were orally treated with the lytic gut …

Natural mummification of the human gut preserves bacteriophage DNA

TM Santiago-Rodriguez, G Fornaciari… - FEMS Microbiology …, 2016 - academic.oup.com
The natural mummification process of the human gut represents a unique opportunity to
study the resulting microbial community structure and composition. While results are …

Relationship between nutrient intake and human gut microbiota in monozygotic twins

N Matsumoto, J Park, R Tomizawa, H Kawashima… - Medicina, 2021 - mdpi.com
Background and Objectives: The gut microbiota is associated with human health and dietary
nutrition. Various studies have been reported in this regard, but it is difficult to clearly …