Bacterial strain typing in the genomic era

W Li, D Raoult, PE Fournier - FEMS microbiology reviews, 2009 - academic.oup.com
Bacterial strain typing, or identifying bacteria at the strain level, is particularly important for
diagnosis, treatment, and epidemiological surveillance of bacterial infections. This is …

Glanders in animals: a review on epidemiology, clinical presentation, diagnosis and countermeasures

I Khan, LH Wieler, F Melzer… - Transboundary and …, 2013 - Wiley Online Library
Glanders or farcy, caused by Burkholderia mallei, is an infectious and zoonotic disease of
solipeds. Horses, donkeys and mules are the only known natural reservoir of B. mallei …

Contributions of North American endophytes to the phylogeny, ecology, and taxonomy of Xylariaceae (Sordariomycetes, Ascomycota)

JM U'Ren, J Miadlikowska, NB Zimmerman… - Molecular Phylogenetics …, 2016 - Elsevier
Abstract The Xylariaceae (Sordariomycetes) comprise one of the largest and most diverse
families of Ascomycota, with at least 85 accepted genera and ca. 1343 accepted species. In …

[HTML][HTML] High-throughput, kingdom-wide prediction and annotation of bacterial non-coding RNAs

J Livny, H Teonadi, M Livny, MK Waldor - PloS one, 2008 - journals.plos.org
Background Diverse bacterial genomes encode numerous small non-coding RNAs (sRNAs)
that regulate myriad biological processes. While bioinformatic algorithms have proven …

[HTML][HTML] Phylogeographic reconstruction of a bacterial species with high levels of lateral gene transfer

T Pearson, P Giffard, S Beckstrom-Sternberg… - BMC biology, 2009 - Springer
Background Phylogeographic reconstruction of some bacterial populations is hindered by
low diversity coupled with high levels of lateral gene transfer. A comparison of …

[HTML][HTML] Evolution of Burkholderia pseudomallei in Recurrent Melioidosis

HS Hayden, R Lim, MJ Brittnacher, EH Sims… - PloS one, 2012 - journals.plos.org
Burkholderia pseudomallei, the etiologic agent of human melioidosis, is capable of causing
severe acute infection with overwhelming septicemia leading to death. A high rate of …

[HTML][HTML] Characterization of Ceftazidime Resistance Mechanisms in Clinical Isolates of Burkholderia pseudomallei from Australia

DS Sarovich, EP Price, AT Von Schulze, JM Cook… - PloS one, 2012 - journals.plos.org
Burkholderia pseudomallei is a Gram-negative bacterium that causes the serious human
disease, melioidosis. There is no vaccine against melioidosis and it can be fatal if not treated …

Glanders and the risk for its introduction through the international movement of horses

ANB Kettle, U Wernery - Equine Veterinary Journal, 2016 - Wiley Online Library
Glanders is the contagious zoonotic disease caused by infection with Burkholderia mallei. It
affects primarily horses, donkeys and mules. The disease was eradicated from large areas …

[HTML][HTML] Genetic diversity and spatial distribution of Burkholderia mallei by core genome-based multilocus sequence typing analysis

S Appelt, AM Rohleder, D Jacob, H Von Buttlar… - PLoS …, 2022 - journals.plos.org
Burkholderia mallei is the etiological agent of glanders, a highly contagious and often fatal
disease in equids. Due to the high genetic clonality of B. mallei, high-resolution typing …

Predicting the genetic stability of engineered DNA sequences with the EFM calculator

BR Jack, SP Leonard, DM Mishler, BA Renda… - ACS synthetic …, 2015 - ACS Publications
Unwanted evolution can rapidly degrade the performance of genetically engineered circuits
and metabolic pathways installed in living organisms. We created the Evolutionary Failure …