Forest tree genomics: growing resources and applications

DB Neale, A Kremer - Nature Reviews Genetics, 2011 - nature.com
Over the past two decades, research in forest tree genomics has lagged behind that of
model and agricultural systems. However, genomic research in forest trees is poised to enter …

Dormancy in temperate fruit trees in a global warming context: a review

JA Campoy, D Ruiz, J Egea - Scientia Horticulturae, 2011 - Elsevier
Dormancy is the mechanism that plants use to protect sensitive tissue from unfavourable
climatic conditions. In a changing global environment, temperate fruit crop adaptation might …

JGI Plant Gene Atlas: an updateable transcriptome resource to improve functional gene descriptions across the plant kingdom

A Sreedasyam, C Plott, MS Hossain… - Nucleic acids …, 2023 - academic.oup.com
Gene functional descriptions offer a crucial line of evidence for candidate genes underlying
trait variation. Conversely, plant responses to environmental cues represent important …

Alternative Splicing Mediates Responses of the Arabidopsis Circadian Clock to Temperature Changes

AB James, NH Syed, S Bordage, J Marshall… - The Plant …, 2012 - academic.oup.com
Alternative splicing plays crucial roles by influencing the diversity of the transcriptome and
proteome and regulating protein structure/function and gene expression. It is widespread in …

Molecular and physiological responses to abiotic stress in forest trees and their relevance to tree improvement

A Harfouche, R Meilan, A Altman - Tree physiology, 2014 - academic.oup.com
Abiotic stresses, such as drought, salinity and cold, are the major environmental stresses
that adversely affect tree growth and, thus, forest productivity, and play a major role in …

STRESSing the role of the plant circadian clock

PJ Seo, P Mas - Trends in Plant Science, 2015 - cell.com
The circadian clock is a timekeeper mechanism that is able to regulate biological activities
with a period of 24h. Proper matching of the internal circadian time with the environment not …

Similarities in the circadian clock and photoperiodism in plants

YH Song, S Ito, T Imaizumi - Current opinion in plant biology, 2010 - Elsevier
Plants utilize circadian clocks to synchronize their physiological and developmental events
with daily and yearly changes in the environment. Recent advances in Arabidopsis research …

Non-structural carbohydrates in dormant woody perennials; the tale of winter survival and spring arrival

A Tixier, GA Gambetta, J Godfrey, J Orozco… - Frontiers in Forests …, 2019 - frontiersin.org
Woody perennials' reliance on nonstructural carbohydrates (NSC) reserves for the
resumption of spring growth necessitates an accumulation of NSC prior to dormancy. It is …

Interaction with diurnal and circadian regulation results in dynamic metabolic and transcriptional changes during cold acclimation in Arabidopsis

C Espinoza, T Degenkolbe, C Caldana, E Zuther… - PloS one, 2010 - journals.plos.org
In plants, there is a large overlap between cold and circadian regulated genes and in
Arabidopsis, we have shown that cold (4° C) affects the expression of clock oscillator genes …

Transcriptomic analysis of 'Suli' pear (Pyrus pyrifolia white pear group) buds during the dormancy by RNA-Seq

G Liu, W Li, P Zheng, T Xu, L Chen, D Liu, S Hussain… - BMC genomics, 2012 - Springer
Background Bud dormancy is a critical developmental process that allows perennial plants
to survive unfavorable environmental conditions. Pear is one of the most important …