[HTML][HTML] Multi-omics approaches for biomarker discovery in early ovarian cancer diagnosis
Y Xiao, M Bi, H Guo, M Li - EBioMedicine, 2022 - thelancet.com
Ovarian cancer (OC) is a heterogeneous disease with the highest mortality rate and the
poorest prognosis among gynecological malignancies. Because of the absence of specific …
poorest prognosis among gynecological malignancies. Because of the absence of specific …
Aberrant RNA splicing in cancer; expression changes and driver mutations of splicing factor genes
A Sveen, S Kilpinen, A Ruusulehto, RA Lothe… - Oncogene, 2016 - nature.com
Alternative splicing is a widespread process contributing to structural transcript variation and
proteome diversity. In cancer, the splicing process is commonly disrupted, resulting in both …
proteome diversity. In cancer, the splicing process is commonly disrupted, resulting in both …
A comprehensive assessment of RNA-seq accuracy, reproducibility and information content by the Sequencing Quality Control Consortium
Nature biotechnology, 2014 - nature.com
We present primary results from the Sequencing Quality Control (SEQC) project,
coordinated by the US Food and Drug Administration. Examining Illumina HiSeq, Life …
coordinated by the US Food and Drug Administration. Examining Illumina HiSeq, Life …
Non-coding RNAs in cardiovascular cell biology and atherosclerosis
F Fasolo, K Di Gregoli, L Maegdefessel… - Cardiovascular …, 2019 - academic.oup.com
Atherosclerosis underlies the predominant number of cardiovascular diseases and remains
a leading cause of morbidity and mortality worldwide. The development, progression and …
a leading cause of morbidity and mortality worldwide. The development, progression and …
The concordance between RNA-seq and microarray data depends on chemical treatment and transcript abundance
The concordance of RNA-sequencing (RNA-seq) with microarrays for genome-wide
analysis of differential gene expression has not been rigorously assessed using a range of …
analysis of differential gene expression has not been rigorously assessed using a range of …
Integrative genomic analyses reveal clinically relevant long noncoding RNAs in human cancer
Despite growing appreciation of the importance of long noncoding RNAs (lncRNAs) in
normal physiology and disease, our knowledge of cancer-related lncRNAs remains limited …
normal physiology and disease, our knowledge of cancer-related lncRNAs remains limited …
A comprehensive time-course–based multicohort analysis of sepsis and sterile inflammation reveals a robust diagnostic gene set
TE Sweeney, A Shidham, HR Wong… - Science translational …, 2015 - science.org
Although several dozen studies of gene expression in sepsis have been published,
distinguishing sepsis from a sterile systemic inflammatory response syndrome (SIRS) is still …
distinguishing sepsis from a sterile systemic inflammatory response syndrome (SIRS) is still …
Next-generation sequencing in the clinic: promises and challenges
The advent of next generation sequencing (NGS) technologies has revolutionized the field
of genomics, enabling fast and cost-effective generation of genome-scale sequence data …
of genomics, enabling fast and cost-effective generation of genome-scale sequence data …
[HTML][HTML] Viral-human chimeric transcript predisposes risk to liver cancer development and progression
The mutagenic effect of hepatitis B (HBV) integration in predisposing risk to hepatocellular
carcinoma (HCC) remains elusive. In this study, we performed transcriptome sequencing of …
carcinoma (HCC) remains elusive. In this study, we performed transcriptome sequencing of …
[HTML][HTML] A look into retinal organoids: methods, analytical techniques, and applications
Inherited retinal diseases (IRDs) cause progressive loss of light-sensitive photoreceptors in
the eye and can lead to blindness. Gene-based therapies for IRDs have shown remarkable …
the eye and can lead to blindness. Gene-based therapies for IRDs have shown remarkable …