Organization and function of the 3D genome
Understanding how chromatin is organized within the nucleus and how this 3D architecture
influences gene regulation, cell fate decisions and evolution are major questions in cell …
influences gene regulation, cell fate decisions and evolution are major questions in cell …
Principles of genome folding into topologically associating domains
Understanding the mechanisms that underlie chromosome folding within cell nuclei is
essential to determine the relationship between genome structure and function. The recent …
essential to determine the relationship between genome structure and function. The recent …
Transcriptional coupling of distant regulatory genes in living embryos
The prevailing view of metazoan gene regulation is that individual genes are independently
regulated by their own dedicated sets of transcriptional enhancers. Past studies have …
regulated by their own dedicated sets of transcriptional enhancers. Past studies have …
Visualizing DNA folding and RNA in embryos at single-cell resolution
The establishment of cell types during development requires precise interactions between
genes and distal regulatory sequences. We have a limited understanding of how these …
genes and distal regulatory sequences. We have a limited understanding of how these …
High-resolution TADs reveal DNA sequences underlying genome organization in flies
Despite an abundance of new studies about topologically associating domains (TADs), the
role of genetic information in TAD formation is still not fully understood. Here we use our …
role of genetic information in TAD formation is still not fully understood. Here we use our …
Ever-changing landscapes: transcriptional enhancers in development and evolution
HK Long, SL Prescott, J Wysocka - Cell, 2016 - cell.com
A class of cis-regulatory elements, called enhancers, play a central role in orchestrating
spatiotemporally precise gene-expression programs during development. Consequently …
spatiotemporally precise gene-expression programs during development. Consequently …
[HTML][HTML] Formation of chromosomal domains by loop extrusion
Topologically associating domains (TADs) are fundamental structural and functional
building blocks of human interphase chromosomes, yet the mechanisms of TAD formation …
building blocks of human interphase chromosomes, yet the mechanisms of TAD formation …
Chromatin domains: the unit of chromosome organization
How eukaryotic chromosomes fold inside the nucleus is an age-old question that remains
unanswered today. Early biochemical and microscopic studies revealed the existence of …
unanswered today. Early biochemical and microscopic studies revealed the existence of …
[HTML][HTML] Disruptions of topological chromatin domains cause pathogenic rewiring of gene-enhancer interactions
Mammalian genomes are organized into megabase-scale topologically associated domains
(TADs). We demonstrate that disruption of TADs can rewire long-range regulatory …
(TADs). We demonstrate that disruption of TADs can rewire long-range regulatory …
The role of transcription in shaping the spatial organization of the genome
B van Steensel, EEM Furlong - Nature reviews Molecular cell biology, 2019 - nature.com
The spatial organization of the genome into compartments and topologically associated
domains can have an important role in the regulation of gene expression. But could gene …
domains can have an important role in the regulation of gene expression. But could gene …