CITEdb: a manually curated database of cell–cell interactions in human
N Shan, Y Lu, H Guo, D Li, J Jiang, L Yan, J Gao… - …, 2022 - academic.oup.com
Motivation The interactions among various types of cells play critical roles in cell functions
and the maintenance of the entire organism. While cell–cell interactions are traditionally …
and the maintenance of the entire organism. While cell–cell interactions are traditionally …
Building a knowledge base for systems pathology
H Michael, J Hogan, A Kel… - Briefings in …, 2008 - academic.oup.com
Translating the exponentially growing amount of omics data into knowledge usable for a
personalized medicine approach poses a formidable challenge. In this article—taking …
personalized medicine approach poses a formidable challenge. In this article—taking …
The ontology-based answers (OBA) service: a connector for embedded usage of ontologies in applications
J Dönitz, E Wingender - Frontiers in genetics, 2012 - frontiersin.org
The semantic web depends on the use of ontologies to let electronic systems interpret
contextual information. Optimally, the handling and access of ontologies should be …
contextual information. Optimally, the handling and access of ontologies should be …
Predicting the phenotypic values of physiological traits using SNP genotype and gene expression data in mice
Y Takagi, H Matsuda, Y Taniguchi, H Iwaisaki - PLoS One, 2014 - journals.plos.org
Predicting phenotypes using genome-wide genetic variation and gene expression data is
useful in several fields, such as human biology and medicine, as well as in crop and …
useful in several fields, such as human biology and medicine, as well as in crop and …
[HTML][HTML] Reverse tracking from drug-induced transcriptomes through multilayer molecular networks reveals hidden drug targets
Identifying molecular targets of a drug is an essential process for drug discovery and
development. The recent in-silico approaches are usually based on the structure information …
development. The recent in-silico approaches are usually based on the structure information …
EndoNet: an information resource about the intercellular signaling network
J Dönitz, E Wingender - BMC systems biology, 2014 - Springer
Background In multicellular organisms, an intercellular signaling network communicates
information from the environment or distant tissues to defined target cells. Intercellular …
information from the environment or distant tissues to defined target cells. Intercellular …
geneXplain—eine integrierte Bioinformatik-Plattform
E Wingender, A Kel - BIOspektrum, 2012 - Springer
Bioinformatics tools are today an indispensable part of life-science research. There is a
huge demand of intuitively usable bioinformatics tools, which enable experimental …
huge demand of intuitively usable bioinformatics tools, which enable experimental …
Annotation extension through protein family annotation coherence metrics
Protein functional annotation consists in associating proteins with textual descriptors
elucidating their biological roles. The bulk of annotation is done via automated procedures …
elucidating their biological roles. The bulk of annotation is done via automated procedures …
Molekularbiologische Datenbanken und Austauschformate
S Eckstein, S Eckstein - Informationsmanagement in der Systembiologie …, 2011 - Springer
Zusammenfassung Durch Experimente und deren Beobachtungen entstehen
experimentelle Daten. Durch Massenexperimente–wie zum Beispiel Gensequenzierungen …
experimentelle Daten. Durch Massenexperimente–wie zum Beispiel Gensequenzierungen …
[引用][C] Development and application of ontologies for biological applications
PEI im Promotionsprogramm Umweltinformatik…