[HTML][HTML] Computerized cell tracking: Current methods, tools and challenges
N Emami, Z Sedaei, R Ferdousi - Visual Informatics, 2021 - Elsevier
In developmental biology, knowledge of cell structure and their (morpho) dynamic behavior,
leads to a comprehensive understanding of their conducts and the mechanisms in which …
leads to a comprehensive understanding of their conducts and the mechanisms in which …
[HTML][HTML] Characterising live cell behaviour: Traditional label-free and quantitative phase imaging approaches
R Kasprowicz, R Suman, P O'Toole - … journal of biochemistry & cell biology, 2017 - Elsevier
Label-free imaging uses inherent contrast mechanisms within cells to create image contrast
without introducing dyes/labels, which may confound results. Quantitative phase imaging is …
without introducing dyes/labels, which may confound results. Quantitative phase imaging is …
TrackMate: An open and extensible platform for single-particle tracking
We present TrackMate, an open source Fiji plugin for the automated, semi-automated, and
manual tracking of single-particles. It offers a versatile and modular solution that works out of …
manual tracking of single-particles. It offers a versatile and modular solution that works out of …
Exercise rejuvenates quiescent skeletal muscle stem cells in old mice through restoration of Cyclin D1
JO Brett, M Arjona, M Ikeda, M Quarta, A de Morrée… - Nature …, 2020 - nature.com
Ageing impairs tissue repair. This defect is pronounced in skeletal muscle, whose
regeneration by muscle stem cells (MuSCs) is robust in young-adult animals, but inefficient …
regeneration by muscle stem cells (MuSCs) is robust in young-adult animals, but inefficient …
[HTML][HTML] Usiigaci: Instance-aware cell tracking in stain-free phase contrast microscopy enabled by machine learning
Stain-free, single-cell segmentation and tracking is tantamount to the holy grail of
microscopic cell migration analysis. Phase contrast microscopy (PCM) images with cells at …
microscopic cell migration analysis. Phase contrast microscopy (PCM) images with cells at …
[HTML][HTML] Automated cell tracking using StarDist and TrackMate
The ability of cells to migrate is a fundamental physiological process involved in embryonic
development, tissue homeostasis, immune surveillance, and wound healing. Therefore, the …
development, tissue homeostasis, immune surveillance, and wound healing. Therefore, the …
Behaviors of Glioblastoma Cells in in Vitro Microenvironments
W Diao, X Tong, C Yang, F Zhang, C Bao, H Chen… - Scientific reports, 2019 - nature.com
Glioblastoma (GBM) is the most malignant and highly aggressive brain tumor. In this study,
four types of typical GBM cell lines (LN229, SNB19, U87, U251) were cultured in a …
four types of typical GBM cell lines (LN229, SNB19, U87, U251) were cultured in a …
CellTracker (not only) for dummies
F Piccinini, A Kiss, P Horvath - Bioinformatics, 2016 - academic.oup.com
Motivation: Time-lapse experiments play a key role in studying the dynamic behavior of
cells. Single-cell tracking is one of the fundamental tools for such analyses. The vast majority …
cells. Single-cell tracking is one of the fundamental tools for such analyses. The vast majority …
Taking aim at moving targets in computational cell migration
Cell migration is central to the development and maintenance of multicellular organisms.
Fundamental understanding of cell migration can, for example, direct novel therapeutic …
Fundamental understanding of cell migration can, for example, direct novel therapeutic …
SEMA7a primes integrin α5β1 engagement instructing fibroblast mechanotransduction, phenotype and transcriptional programming
Integrins are cellular receptors that bind the extracellular matrix (ECM) and facilitate the
transduction of biochemical and biophysical microenvironment cues into cellular responses …
transduction of biochemical and biophysical microenvironment cues into cellular responses …