Performance and application of 16S rRNA gene cycle sequencing for routine identification of bacteria in the clinical microbiology laboratory
DL Church, L Cerutti, A Gürtler, T Griener… - Clinical microbiology …, 2020 - Am Soc Microbiol
This review provides a state-of-the-art description of the performance of Sanger cycle
sequencing of the 16S rRNA gene for routine identification of bacteria in the clinical …
sequencing of the 16S rRNA gene for routine identification of bacteria in the clinical …
Taxonomy and Phylogenetic Research on Ralstonia solanacearum Species Complex: A Complex Pathogen with Extraordinary Economic Consequences
The bacterial wilt pathogen, first known as Bacillus solanacearum, has undergone
numerous taxonomic changes since its first description in 1896. The history and significance …
numerous taxonomic changes since its first description in 1896. The history and significance …
Age-based dynamic changes of phylogenetic composition and interaction networks of health pig gut microbiome feeding in a uniformed condition
S Ke, S Fang, M He, X Huang, H Yang, B Yang… - BMC veterinary …, 2019 - Springer
Background The gut microbiota impacts on a range of host biological processes, and the
imbalances in its composition are associated with pathology. Though the understanding of …
imbalances in its composition are associated with pathology. Though the understanding of …
Pseudomonas rhizophila S211, a New Plant Growth-Promoting Rhizobacterium with Potential in Pesticide-Bioremediation
W Hassen, M Neifar, H Cherif, A Najjari… - Frontiers in …, 2018 - frontiersin.org
A number of Pseudomonas strains function as inoculants for biocontrol, biofertilization, and
phytostimulation, avoiding the use of pesticides and chemical fertilizers. Here, we present a …
phytostimulation, avoiding the use of pesticides and chemical fertilizers. Here, we present a …
Minimal standards for describing new species belonging to the families Campylobacteraceae and Helicobacteraceae: Campylobacter, Arcobacter, Helicobacter and …
SLW On, WG Miller, K Houf, JG Fox… - … of systematic and …, 2017 - microbiologyresearch.org
Ongoing changes in taxonomic methods, and in the rapid development of the taxonomic
structure of species assigned to the Epsilonproteobacteria have lead the International …
structure of species assigned to the Epsilonproteobacteria have lead the International …
A re-evaluation of the taxonomy of phytopathogenic genera Dickeya and Pectobacterium using whole-genome sequencing data
Abstract The genera Dickeya and Pectobacterium contain important plant pathogens.
However, species from these genera are often poorly defined and some new isolates could …
However, species from these genera are often poorly defined and some new isolates could …
[PDF][PDF] A fast alignment-free bioinformatics procedure to infer accurate distance-based phylogenetic trees from genome assemblies
A Criscuolo - Research Ideas and Outcomes, 2019 - riojournal.com
This paper describes a novel alignment-free distance-based procedure for inferring
phylogenetic trees from genome contig sequences using publicly available bioinformatics …
phylogenetic trees from genome contig sequences using publicly available bioinformatics …
Effect of bacterial cell addition on Fe (III) reduction and soil organic matter transformation in a farmland soil
The coupled biogeochemical processes of Fe (III) reduction and organic matter
transformation profoundly impact terrestrial carbon cycling. However, little is known about …
transformation profoundly impact terrestrial carbon cycling. However, little is known about …
Degradation of antibiotics and antibiotic resistance genes in erythromycin fermentation residues using radiation coupled with peroxymonosulfate oxidation
L Chu, D Chen, J Wang, Z Yang, Y Shen - Waste Management, 2019 - Elsevier
Ionizing radiation coupled with peroxymonosulfate (PMS) oxidation was developed to
degrade antibiotics and antibiotic resistance genes (ARGs) from the erythromycin …
degrade antibiotics and antibiotic resistance genes (ARGs) from the erythromycin …
Enhanced production of secondary biogenic coalbed natural gas from a subbituminous coal treated by hydrogen peroxide and its geochemical and microbiological …
Unmineable coal accounts for over 90% of the world's fossil fuel resources. Fortunately,
many coal seams contain indigenous microorganisms capable of utilizing the coal as a …
many coal seams contain indigenous microorganisms capable of utilizing the coal as a …