[HTML][HTML] Advances in the integration of metabolomics and metagenomics for human gut microbiome and their clinical applications

F Puig-Castellví, R Pacheco-Tapia, M Deslande… - TrAC Trends in …, 2023 - Elsevier
The human microbiome and its metabolic output play an important role in shaping human
health and disease. The host-microbe crosstalk is often characterised using metabolomics …

A practical guide to the discovery of biomolecules with biostimulant activity

J Li, R Lardon, S Mangelinckx… - Journal of Experimental …, 2024 - academic.oup.com
The growing demand for sustainable solutions in agriculture, which are critical for crop
productivity and food quality in the face of climate change and the need to reduce …

[HTML][HTML] DeepSAT: learning molecular Structures from nuclear magnetic resonance data

HW Kim, C Zhang, R Reher, M Wang… - Journal of …, 2023 - Springer
The identification of molecular structure is essential for understanding chemical diversity and
for developing drug leads from small molecules. Nevertheless, the structure elucidation of …

High-confidence structural annotation of substances via multi-layer molecular network reveals the system-wide constituent alternations in milk interfered with …

Z Fan, W Jia - Journal of Hazardous Materials, 2024 - Elsevier
The spectral database-based mass spectrometry (MS) matching strategy is versatile for
structural annotating in ingredient fluctuation profiling mediated by external interferences …

Interplay of emerging and established technologies drives innovation in natural product antibiotic discovery

CD Bader, AL Nichols, D Yang, B Shen - Current Opinion in Microbiology, 2023 - Elsevier
A continued rise of antibiotic resistance and shortages of effective antibiotics necessitate the
discovery and development of new antibiotics with novel modes of action (MoAs) against …

[HTML][HTML] Modern trends in natural antibiotic discovery

AA Baranova, VA Alferova, VA Korshun, AP Tyurin - Life, 2023 - mdpi.com
Natural scaffolds remain an important basis for drug development. Therefore, approaches to
natural bioactive compound discovery attract significant attention. In this account, we …

Tailored mass spectral data exploration using the specXplore interactive dashboard

K Mildau, H Ehlers, I Oesterle, M Pristner… - Analytical …, 2024 - ACS Publications
Untargeted metabolomics promises comprehensive characterization of small molecules in
biological samples. However, the field is hampered by low annotation rates and abstract …

A vast repertoire of secondary metabolites potentially influences community dynamics and biogeochemical processes in cold seeps

X Dong, T Zhang, W Wu, Y Peng, X Liu, Y Han… - Science …, 2024 - science.org
In deep-sea cold seeps, microbial communities thrive on the geological seepage of
hydrocarbons and inorganic compounds, differing from photosynthetically driven …

[HTML][HTML] Systems Theory-Driven Framework for AI Integration into the Holistic Material Basis Research of Traditional Chinese Medicine

J Zeng, X Jia - Engineering, 2024 - Elsevier
This research introduces a systems theory-driven framework to integration artificial
intelligence (AI) into traditional Chinese medicine (TCM) research, enhancing the …

[HTML][HTML] Computation-aided studies related to the induction of specialized metabolite biosynthesis in microbial co-cultures: An introductory overview

T Boruta - Computational and Structural Biotechnology Journal, 2023 - Elsevier
Co-cultivation is an effective method of inducing the production of specialized metabolites
(SMs) in microbial strains. By mimicking the ecological interactions that take place in natural …