Electrocatalytic investigation by improving the charge kinetics between carbon electrodes and dopamine using bio-synthesized CuO nanoparticles

S Rajendrachari, G Kudur Jayaprakash, A Pandith… - Catalysts, 2022 - mdpi.com
We have successfully studied the charge transfer kinetics between carbon paste electrodes
and dopamine using green synthesized rectangular monoclinic CuO nanoparticles (NPs) …

Molecular simulations with in-deMon2k QM/MM, a tutorial-review

A de La Lande, A Alvarez-Ibarra, K Hasnaoui… - Molecules, 2019 - mdpi.com
deMon2k is a readily available program specialized in Density Functional Theory (DFT)
simulations within the framework of Auxiliary DFT. This article is intended as a tutorial-review …

Multiscale molecular modelling: from electronic structure to dynamics of nanosystems and beyond

DR Salahub - Physical Chemistry Chemical Physics, 2022 - pubs.rsc.org
Important contemporary biological and materials problems often depend on interactions that
span orders of magnitude differences in spatial and temporal dimensions. This Tutorial …

Cuby: An integrative framework for computational chemistry

J Řezáč - 2016 - Wiley Online Library
Cuby is a computational chemistry framework written in the Ruby programming language. It
provides unified access to a wide range of computational methods by interfacing external …

Simulating electron dynamics in polarizable environments

X Wu, JM Teuler, F Cailliez, C Clavaguéra… - Journal of Chemical …, 2017 - ACS Publications
We propose a methodology for simulating attosecond electron dynamics in large molecular
systems. Our approach is based on the combination of real time time-dependent-density …

Anharmonic vibrational analysis of biomolecules and solvated molecules using hybrid QM/MM computations

K Yagi, K Yamada, C Kobayashi… - Journal of Chemical …, 2019 - ACS Publications
Quantum mechanics/molecular mechanics (QM/MM) calculations are applied for
anharmonic vibrational analyses of biomolecules and solvated molecules. The QM/MM …

Current status of deMon2k for the investigation of the early stages of matter irradiation by time-dependent DFT approaches

KA Omar, FA Korsaye, R Tandiana, D Tolu… - The European Physical …, 2023 - Springer
We summarize in this article the recent progress made in our laboratories in the
development of numerical approaches dedicated to investigating ultrafast physicochemical …

Multicomponent density functional theory with density fitting

D Mejía-Rodríguez, A de la Lande - The Journal of Chemical Physics, 2019 - pubs.aip.org
Multicomponent Density Functional Theory (MDFT) is a promising methodology to
incorporate nuclear quantum effects, such as zero-point energy or tunneling, or to simulate …

On the accuracy of population analyses based on fitted densities#

A de la Lande, C Clavaguéra, A Köster - Journal of molecular modeling, 2017 - Springer
Population analyses are part of the theoretical chemist's toolbox. They provide means to
extract information about the repartition of the electronic density among molecules or solids …

A new mixed self-consistent field procedure

A Alvarez-Ibarra, AM Köster - Molecular Physics, 2015 - Taylor & Francis
A new approach for the calculation of three-centre electronic repulsion integrals (ERIs) is
developed, implemented and benchmarked in the framework of auxiliary density functional …