[HTML][HTML] Classification of intrinsically disordered regions and proteins

R Van Der Lee, M Buljan, B Lang, RJ Weatheritt… - Chemical …, 2014 - ACS Publications
Over the past decade, we have observed a massive increase in the amount of information
describing protein sequences from a variety of organisms. 1, 2 While this may reflect the …

[HTML][HTML] Alcohol use and burden for 195 countries and territories, 1990–2016: a systematic analysis for the Global Burden of Disease Study 2016

MG Griswold, N Fullman, C Hawley, N Arian… - The Lancet, 2018 - thelancet.com
Background Alcohol use is a leading risk factor for death and disability, but its overall
association with health remains complex given the possible protective effects of moderate …

Searching molecular structure databases with tandem mass spectra using CSI: FingerID

K Dührkop, H Shen, M Meusel… - Proceedings of the …, 2015 - National Acad Sciences
Metabolites provide a direct functional signature of cellular state. Untargeted metabolomics
experiments usually rely on tandem MS to identify the thousands of compounds in a …

Deciphering key features in protein structures with the new ENDscript server

X Robert, P Gouet - Nucleic acids research, 2014 - academic.oup.com
ENDscript 2 is a friendly Web server for extracting and rendering a comprehensive analysis
of primary to quaternary protein structure information in an automated way. This major …

ClinVar: public archive of relationships among sequence variation and human phenotype

MJ Landrum, JM Lee, GR Riley, W Jang… - Nucleic acids …, 2014 - academic.oup.com
Abstract ClinVar (http://www. ncbi. nlm. nih. gov/clinvar/) provides a freely available archive
of reports of relationships among medically important variants and phenotypes. ClinVar …

DrugBank 4.0: shedding new light on drug metabolism

V Law, C Knox, Y Djoumbou, T Jewison… - Nucleic acids …, 2014 - academic.oup.com
Abstract DrugBank (http://www. drugbank. ca) is a comprehensive online database
containing extensive biochemical and pharmacological information about drugs, their …

The Database of Genomic Variants: a curated collection of structural variation in the human genome

JR MacDonald, R Ziman, RKC Yuen… - Nucleic acids …, 2014 - academic.oup.com
Over the past decade, the Database of Genomic Variants (DGV; http://dgv. tcag. ca/) has
provided a publicly accessible, comprehensive curated catalogue of structural variation (SV) …

OptiType: precision HLA typing from next-generation sequencing data

A Szolek, B Schubert, C Mohr, M Sturm… - …, 2014 - academic.oup.com
Motivation: The human leukocyte antigen (HLA) gene cluster plays a crucial role in adaptive
immunity and is thus relevant in many biomedical applications. While next-generation …

RefSeq: an update on mammalian reference sequences

KD Pruitt, GR Brown, SM Hiatt… - Nucleic acids …, 2014 - academic.oup.com
Abstract The National Center for Biotechnology Information (NCBI) Reference Sequence
(RefSeq) database is a collection of annotated genomic, transcript and protein sequence …

MEROPS: the database of proteolytic enzymes, their substrates and inhibitors

ND Rawlings, M Waller, AJ Barrett… - Nucleic acids …, 2014 - academic.oup.com
Peptidases, their substrates and inhibitors are of great relevance to biology, medicine and
biotechnology. The MEROPS database (http://merops. sanger. ac. uk) aims to fulfill the need …