Whole-genome duplication in teleost fishes and its evolutionary consequences

SMK Glasauer, SCF Neuhauss - Molecular genetics and genomics, 2014 - Springer
Whole-genome duplication (WGD) events have shaped the history of many evolutionary
lineages. One such duplication has been implicated in the evolution of teleost fishes, by far …

Genome sequencing and population genomics in non-model organisms

H Ellegren - Trends in ecology & evolution, 2014 - cell.com
High-throughput sequencing technologies are revolutionizing the life sciences. The past 12
months have seen a burst of genome sequences from non-model organisms, in each case …

The Ensembl gene annotation system

BL Aken, S Ayling, D Barrell, L Clarke, V Curwen… - Database, 2016 - academic.oup.com
The Ensembl gene annotation system has been used to annotate over 70 different
vertebrate species across a wide range of genome projects. Furthermore, it generates the …

The sterlet sturgeon genome sequence and the mechanisms of segmental rediploidization

K Du, M Stöck, S Kneitz, C Klopp… - Nature ecology & …, 2020 - nature.com
Sturgeons seem to be frozen in time. The archaic characteristics of this ancient fish lineage
place it in a key phylogenetic position at the base of the~ 30,000 modern teleost fish …

Natural selection interacts with recombination to shape the evolution of hybrid genomes

M Schumer, C Xu, DL Powell, A Durvasula, L Skov… - Science, 2018 - science.org
To investigate the consequences of hybridization between species, we studied three
replicate hybrid populations that formed naturally between two swordtail fish species …

European sea bass genome and its variation provide insights into adaptation to euryhalinity and speciation

M Tine, H Kuhl, PA Gagnaire, B Louro… - Nature …, 2014 - nature.com
Abstract The European sea bass (Dicentrarchus labrax) is a temperate-zone euryhaline
teleost of prime importance for aquaculture and fisheries. This species is subdivided into two …

Comparative analysis of transposable elements highlights mobilome diversity and evolution in vertebrates

D Chalopin, M Naville, F Plard… - Genome biology and …, 2015 - academic.oup.com
Transposable elements (TEs) are major components of vertebrate genomes, with major
roles in genome architecture and evolution. In order to characterize both common patterns …

The Genome 10K Project: a way forward

KP Koepfli, B Paten… - Annu. Rev. Anim …, 2015 - annualreviews.org
The Genome 10K Project was established in 2009 by a consortium of biologists and
genome scientists determined to facilitate the sequencing and analysis of the complete …

Enigmatic ear stones: what we know about the functional role and evolution of fish otoliths

T Schulz‐Mirbach, F Ladich, M Plath… - Biological Reviews, 2019 - Wiley Online Library
Otoliths in bony fishes play an important role in the senses of balance and hearing. Otolith
mass and shape are, among others, likely to be decisive factors influencing otolith motion …

A lethal mitonuclear incompatibility in complex I of natural hybrids

BM Moran, CY Payne, DL Powell, ENK Iverson… - Nature, 2024 - nature.com
The evolution of reproductive barriers is the first step in the formation of new species and
can help us understand the diversification of life on Earth. These reproductive barriers often …