RNA-targeting CRISPR–Cas systems

SPB van Beljouw, J Sanders… - Nature Reviews …, 2023 - nature.com
CRISPR–Cas is a widespread adaptive immune system in bacteria and archaea that
protects against viral infection by targeting specific invading nucleic acid sequences …

Pseudomonas predators: understanding and exploiting phage–host interactions

J De Smet, H Hendrix, BG Blasdel… - Nature Reviews …, 2017 - nature.com
Species in the genus Pseudomonas thrive in a diverse set of ecological niches and include
crucial pathogens, such as the human pathogen Pseudomonas aeruginosa and the plant …

The spatial heterogeneity of the gut limits predation and fosters coexistence of bacteria and bacteriophages

M Lourenço, L Chaffringeon, Q Lamy-Besnier… - Cell Host & Microbe, 2020 - cell.com
The ecological dynamics underlying the coexistence between antagonistic populations of
bacteria and their viruses, bacteriophages (phages), in the mammalian gut microbiota …

Phage-specific metabolic reprogramming of virocells

C Howard-Varona, MM Lindback, GE Bastien… - The ISME …, 2020 - academic.oup.com
Ocean viruses are abundant and infect 20–40% of surface microbes. Infected cells, termed
virocells, are thus a predominant microbial state. Yet, virocells and their ecosystem impacts …

Metabolomic studies of Pseudomonas aeruginosa

KA Mielko, SJ Jabłoński, J Milczewska, D Sands… - World Journal of …, 2019 - Springer
Pseudomonas aeruginosa is a common, Gram-negative environmental organism. It can be a
significant pathogenic factor of severe infections in humans, especially in cystic fibrosis …

High-throughput mapping of the phage resistance landscape in E. coli

VK Mutalik, BA Adler, HS Rishi, D Piya, C Zhong… - PLoS …, 2020 - journals.plos.org
Bacteriophages (phages) are critical players in the dynamics and function of microbial
communities and drive processes as diverse as global biogeochemical cycles and human …

Diversity, taxonomy, and evolution of archaeal viruses of the class Caudoviricetes

Y Liu, TA Demina, S Roux, P Aiewsakun… - PLoS …, 2021 - journals.plos.org
The archaeal tailed viruses (arTV), evolutionarily related to tailed double-stranded DNA
(dsDNA) bacteriophages of the class Caudoviricetes, represent the most common isolates …

Bacterial vaginosis: An insight into the prevalence, alternative treatments regimen and it's associated resistance patterns

A Javed, F Parvaiz, S Manzoor - Microbial pathogenesis, 2019 - Elsevier
Bacterial Vaginosis (BV) is a complex polymicrobial infection of vagina that shifts the
paradigms of vaginal flora from lactobacilli to opportunistic pathogens. BV is catagorized by …

Individuals at risk for rheumatoid arthritis harbor differential intestinal bacteriophage communities with distinct metabolic potential

MR Mangalea, D Paez-Espino, K Kieft, A Chatterjee… - Cell host & …, 2021 - cell.com
Rheumatoid arthritis (RA) is an autoimmune disease characterized in seropositive
individuals by the presence of anti-cyclic citrullinated protein (CCP) antibodies. RA is linked …

Phage or foe: an insight into the impact of viral predation on microbial communities

L Fernández, A Rodríguez, P García - The ISME journal, 2018 - academic.oup.com
Since their discovery, bacteriophages have been traditionally regarded as the natural
enemies of bacteria. However, recent advances in molecular biology techniques, especially …