Carbon use efficiency of microbial communities: stoichiometry, methodology and modelling

RL Sinsabaugh, S Manzoni, DL Moorhead… - Ecology …, 2013 - Wiley Online Library
Carbon use efficiency (CUE) is a fundamental parameter for ecological models based on the
physiology of microorganisms. CUE determines energy and material flows to higher trophic …

Shallow freshwater ecosystems of the circumpolar Arctic

M Rautio, F Dufresne, I Laurion, S Bonilla… - Ecoscience, 2011 - Taylor & Francis
This review provides a synthesis of limnological data and conclusions from studies on ponds
and small lakes at our research sites in Subarctic and Arctic Canada, Alaska, northern …

Seasonal time bombs: dominant temperate viruses affect Southern Ocean microbial dynamics

JR Brum, BL Hurwitz, O Schofield… - The ISME …, 2016 - academic.oup.com
Rapid warming in the highly productive western Antarctic Peninsula (WAP) region of the
Southern Ocean has affected multiple trophic levels, yet viral influences on microbial …

Using flow cytometry for counting natural planktonic bacteria and understanding the structure of planktonic bacterial communities

JM Gasol, PA Del Giorgio - Scientia Marina, 2000 - scientiamarina.revistas.csic.es
Flow cytometry is rapidly becoming a routine methodology in aquatic microbial ecology. The
combination of simple to use bench-top flow cytometers and highly fluorescent nucleic acid …

Microbial biogeography along an estuarine salinity gradient: combined influences of bacterial growth and residence time

BC Crump, CS Hopkinson, ML Sogin… - Applied and …, 2004 - Am Soc Microbiol
Shifts in bacterioplankton community composition along the salinity gradient of the Parker
River estuary and Plum Island Sound, in northeastern Massachusetts, were related to …

Natural photolysis by ultraviolet irradiance of recalcitrant dissolved organic matter to simple substrates for rapidbacterial metabolism

RG Wetzel, PG Hatcher… - Limnology and …, 1995 - Wiley Online Library
Whole leachate and humic and fulvic acid fractions of dissolved organic matter (DOM)
released from senescent littoral aquatic plants were exposed to varying spectra of ultraviolet …

Significance of size and nucleic acid content heterogeneity as measured by flow cytometry in natural planktonic bacteria

JM Gasol, UL Zweifel, F Peters… - Applied and …, 1999 - Am Soc Microbiol
Total bacterial abundances estimated with different epifluorescence microscopy methods
(4′, 6-diamidino-2-phenylindole [DAPI], SYBR Green, and Live/Dead) and with flow …

Bacterioplankton community shifts in an arctic lake correlate with seasonal changes in organic matter source

BC Crump, GW Kling, M Bahr… - Applied and …, 2003 - Am Soc Microbiol
Seasonal shifts in bacterioplankton community composition in Toolik Lake, a tundra lake on
the North Slope of Alaska, were related to shifts in the source (terrestrial versus …

Compositional changes in free‐living bacterial communities along a salinity gradient in two temperate estuaries

TC Bouvier, PA del Giorgio - Limnology and oceanography, 2002 - Wiley Online Library
There is now clear evidence for major differences in heterotrophic bacterial composition
between freshwater and marine ecosystems. A fundamental question that remains …

Contribution of fungi and bacteria to leaf litter decomposition in a polluted river

C Pascoal, F Cássio - Applied and environmental microbiology, 2004 - Am Soc Microbiol
The contribution of fungi and bacteria to the decomposition of alder leaves was examined at
two reference and two polluted sites in the Ave River (northwestern Portugal). Leaf mass …